evodcinv

Inversion of dispersion curves using Evolutionary Algorithms

https://github.com/keurfonluu/evodcinv

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Inversion of dispersion curves using Evolutionary Algorithms

README.rst

evodcinv
========

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**evodcinv** is a Python library to invert surface wave dispersion data (e.g., phase velocity dispersion curves) for an isotropic layered velocity model using Evolutionary Algorithms. It relies on `stochopy `__ for the evolutionary optimizers while forward modeling is heavy-lifted by `disba `__.

.. figure:: https://raw.githubusercontent.com/keurfonluu/evodcinv/master/.github/sample.png
   :alt: sample
   :width: 100%
   :align: center

   Inversion of phase velocity dispersion curve (fundamental mode).

Features
--------

Invertible data curves:

-  Love-wave phase and/or group velocity dispersion curves,
-  Rayleigh-wave phase and/or group velocity dispersion curves,
-  Rayleigh-wave ellipticity (experimental).

Installation
------------

The recommended way to install **evodcinv** and all its dependencies is through the Python Package Index:

.. code:: bash

   pip install evodcinv --user

Otherwise, clone and extract the package, then run from the package location:

.. code:: bash

   pip install . --user

To test the integrity of the installed package, check out this repository and run:

.. code:: bash

   pytest

Documentation
-------------

Refer to the online `documentation `__ for detailed description of the API and examples.

Alternatively, the documentation can be built using `Sphinx `__:

.. code:: bash

   pip install -r doc/requirements.txt
   sphinx-build -b html doc/source doc/build

Usage
-----

The following example inverts a Rayleigh-wave phase velocity dispersion curve (fundamental mode).

.. code:: python

    from evodcinv import EarthModel, Layer, Curve

    # Initialize model
    model = EarthModel()

    # Build model search boundaries from top to bottom
    # First argument is the bounds of layer's thickness [km]
    # Second argument is the bounds of layer's S-wave velocity [km/s]
    model.add(Layer([0.001, 0.1], [0.1, 3.0]))
    model.add(Layer([0.001, 0.1], [0.1, 3.0]))

    # Configure model
    model.configure(
        optimizer="cpso",  # Evolutionary algorithm
        misfit="rmse",  # Misfit function type
        optimizer_args={
            "popsize": 10,  # Population size
            "maxiter": 100,  # Number of iterations
            "workers": -1,  # Number of cores
            "seed": 0,
        },
    )

    # Define the dispersion curves to invert
    # period and velocity are assumed to be data arrays
    curves = [Curve(period, velocity, 0, "rayleigh", "phase")]

    # Run inversion
    res = model.invert(curves)
    print(res)

Expected output:

.. code-block::

    --------------------------------------------------------------------------------
    Best model out of 501 models (1 run)
  
    Velocity model                                    Model parameters
    ----------------------------------------          ------------------------------
             d        vp        vs       rho                   d        vs        nu
          [km]    [km/s]    [km/s]   [g/cm3]                [km]    [km/s]       [-]
    ----------------------------------------          ------------------------------
        0.0298    0.5033    0.2055    2.0000              0.0298    0.2055    0.4000
        1.0000    2.0586    0.9935    2.0000                   -    0.9935    0.3482
    ----------------------------------------          ------------------------------
  
    Number of layers: 2
    Number of parameters: 5
    Best model misfit: 0.0038
    --------------------------------------------------------------------------------

Contributing
------------

Please refer to the `Contributing
Guidelines `__ to see how you can help. This project is released with a `Code of Conduct `__ which you agree to abide by when contributing.

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Owner

Citation (CITATION.cff)

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Luu"
  given-names: "Keurfon"
  orcid: "https://orcid.org/0000-0001-7927-0019"
title: "evodcinv: Inversion of dispersion curves using Evolutionary Algorithms"
doi: 10.5281/zenodo.5775193
url: https://github.com/keurfonluu/evodcinv
license: BSD-3-Clause

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