duckpgq-extension

DuckDB extension that adds support for SQL/PGQ and graph algorithms

https://github.com/cwida/duckpgq-extension

Science Score: 44.0%

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    Found CITATION.cff file
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Keywords

graph relational-databases sql
Last synced: 6 months ago · JSON representation ·

Repository

DuckDB extension that adds support for SQL/PGQ and graph algorithms

Basic Info
  • Host: GitHub
  • Owner: cwida
  • License: mit
  • Language: C++
  • Default Branch: main
  • Homepage: https://duckpgq.org
  • Size: 8.95 MB
Statistics
  • Stars: 222
  • Watchers: 10
  • Forks: 14
  • Open Issues: 24
  • Releases: 0
Topics
graph relational-databases sql
Created almost 3 years ago · Last pushed 7 months ago
Metadata Files
Readme License Citation

README.md

DuckPGQ

A DuckDB extension for graph workloads that supports the SQL/PGQ standard. For more information, please see the documentation page.

Discord

WIP Disclaimer

This repository is currently a research project and a work in progress. Feel free to play around with it and give us feedback.


Loading DuckPGQ

Since DuckDB v1.0.0, DuckPGQ can be loaded as a community extension without requiring the unsigned flag. From any DuckDB instance, the following two commands will allow you to install and load DuckPGQ: sql install duckpgq from community; load duckpgq; See the DuckPGQ community extension page for more information.

For older DuckDB versions there are two ways to install the DuckPGQ extension. Both ways require DuckDB to be launched in the unsigned mode. The first way is by setting the custom_extension_repository command (see below). The other way is by directly downloading the extension file for your OS + architecture (see the DuckPGQ availibility section)

For CLI: bash duckdb -unsigned bash set custom_extension_repository = 'http://duckpgq.s3.eu-north-1.amazonaws.com'; force install 'duckpgq'; load 'duckpgq';

For Python: ```python import duckdb

conn = duckdb.connect(config = {"allowunsignedextensions": "true"}) conn.execute("set customextensionrepository = 'http://duckpgq.s3.eu-north-1.amazonaws.com';") conn.execute("force install 'duckpgq';") conn.execute("load 'duckpgq';") ```

Direct download

To use the extension, check the direct download links below. To install and load the extension, launch DuckDB in unsigned mode and execute the commands: sql force install 'path/to/duckpgq_extension'; load 'duckpgq';

DuckPGQ Extension Availability

Version v1.2.2 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_musl | [linux_amd64_musl]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_mingw | [windows_amd64_mingw]() |
Version v1.2.1 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_musl | [linux_amd64_musl]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_mingw | [windows_amd64_mingw]() |
Version v1.2.0 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_musl | [linux_amd64_musl]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_mingw | [windows_amd64_mingw]() |
Version v1.1.3 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_rtools | [windows_amd64_rtools]() |
Version v1.1.2 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_rtools | [windows_amd64_rtools]() |
Version v1.1.1 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_rtools | [windows_amd64_rtools]() |
Version v1.1.0 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_rtools | [windows_amd64_rtools]() |
Version v1.0.0 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_gcc4 | [linux_amd64_gcc4]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() | ### Windows | Architecture | Download Link | |--------------|---------------| | amd64 | [windows_amd64]() | | amd64_rtools | [windows_amd64_rtools]() |
Version v0.10.3 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_gcc4 | [linux_amd64_gcc4]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() |
Version v0.10.2 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_gcc4 | [linux_amd64_gcc4]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() |
Version v0.10.1 ### Linux | Architecture | Download Link | |--------------|---------------| | amd64 | [linux_amd64]() | | amd64_gcc4 | [linux_amd64_gcc4]() | | arm64 | [linux_arm64]() | ### Osx | Architecture | Download Link | |--------------|---------------| | amd64 | [osx_amd64]() | | arm64 | [osx_arm64]() | ### Wasm | Architecture | Download Link | |--------------|---------------| | eh | [wasm_eh]() | | mvp | [wasm_mvp]() | | threads | [wasm_threads]() |
Version v0.10.0 ### Osx | Architecture | Download Link | |--------------|---------------| | arm64 | [osx_arm64]() | | arm64 | [osx_arm64]() |

Building

Managing dependencies

DuckDB extensions uses VCPKG for dependency management. Enabling VCPKG is very simple: follow the installation instructions or just run the following: shell git clone https://github.com/Microsoft/vcpkg.git ./vcpkg/bootstrap-vcpkg.sh export VCPKG_TOOLCHAIN_PATH=`pwd`/vcpkg/scripts/buildsystems/vcpkg.cmake Note: VCPKG is only required for extensions that want to rely on it for dependency management. If you want to develop an extension without dependencies, or want to do your own dependency management, just skip this step. Note that the example extension uses VCPKG to build with a dependency for instructive purposes, so when skipping this step the build may not work without removing the dependency.

Build steps

Checkout git submodules: sh git submodule update --init --recursive Now to build the extension, run: sh make <debug> GEN=ninja The location of the binaries depends on the BUILD_TYPE flag (release or debug) specified during the build process. By default, the binaries are organized as follows:

For a release build (make release):

  • DuckDB binary: ./build/release/duckdb
  • Unit tests: ./build/release/test/unittest
  • DuckPGQ extension: ./build/release/extension/duckpgq/duckpgq.duckdb_extension

For a debug build (make debug):

  • DuckDB binary: ./build/debug/duckdb
  • Unit tests: ./build/debug/test/unittest
  • DuckPGQ extension: ./build/debug/extension/duckpgq/duckpgq.duckdb_extension

Ensure you specify the appropriate BUILD_TYPE flag when configuring the build to place binaries in the corresponding directory. - duckdb is the binary for the duckdb shell with the extension code automatically loaded. - unittest is the test runner of duckdb. Again, the extension is already linked into the binary. - duckpgq.duckdb_extension is the loadable binary as it would be distributed.

Running the extension

To run the extension code, simply start the shell with ./build/release/duckdb.

[!CAUTION] Any query containing SQL/PGQ syntax requires a - at the start of the query when building the extension from the source, otherwise, you will experience a segmentation fault. This is not the case when loading the extension from DuckDB.

Running the tests

Different tests can be created for DuckDB extensions. The primary way of testing DuckDB extensions should be the SQL tests in ./test/sql. These SQL tests can be run using: sh make test

Installing the deployed binaries

To install your extension binaries from S3, you will need to do two things. Firstly, DuckDB should be launched with the allow_unsigned_extensions option set to true. How to set this will depend on the client you're using. Some examples:

CLI: shell duckdb -unsigned

Python: python con = duckdb.connect(':memory:', config={'allow_unsigned_extensions' : 'true'})

NodeJS: js db = new duckdb.Database(':memory:', {"allow_unsigned_extensions": "true"});

Secondly, you will need to set the repository endpoint in DuckDB to the HTTP url of your bucket + version of the extension you want to install. To do this run the following SQL query in DuckDB: sql SET custom_extension_repository='bucket.s3.eu-west-1.amazonaws.com/<your_extension_name>/latest'; Note that the /latest path will allow you to install the latest extension version available for your current version of DuckDB. To specify a specific version, you can pass the version instead.

After running these steps, you can install and load your extension using the regular INSTALL/LOAD commands in DuckDB: sql INSTALL duckpgq LOAD duckpgq

Owner

  • Name: CWI Database Architectures Group
  • Login: cwida
  • Kind: organization
  • Location: Amsterdam, The Netherlands

Citation (CITATION.cff)

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "ten Wolde"
  given-names: "Daniel"
  orcid: "https://orcid.org/0009-0008-8502-1148"
title: "DuckPGQ"
url: "https://github.com/cwida/duckpgq-extension"

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Issues and Pull Requests

Last synced: 6 months ago

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Packages

  • Total packages: 1
  • Total downloads: unknown
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 6
proxy.golang.org: github.com/cwida/duckpgq-extension
  • Versions: 6
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.4%
Average: 5.6%
Dependent repos count: 5.8%
Last synced: 6 months ago

Dependencies

.github/workflows/testStockDuckDB.yml actions
.github/workflows/ExtensionTemplate.yml actions
  • ./duckdb/.github/actions/ubuntu_16_setup * composite
  • actions/checkout v3 composite
  • actions/setup-python v2 composite
.github/workflows/Linux.yml actions
  • ./duckdb-pgq/.github/actions/centos_7_setup * composite
  • ./duckdb-pgq/.github/actions/ubuntu_16_setup * composite
  • actions/checkout v3 composite
  • actions/upload-artifact v2 composite
.github/workflows/MacOS.yml actions
  • actions/checkout v3 composite
  • actions/setup-python v2 composite
.github/workflows/NodeJS.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
.github/workflows/Python.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
.github/workflows/Windows.yml actions
  • actions/checkout v3 composite
  • actions/setup-python v2 composite
  • actions/upload-artifact v2 composite