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https://github.com/chris-revell/characteriseshape

https://github.com/chris-revell/characteriseshape

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.3%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: chris-revell
  • License: mit
  • Language: Python
  • Default Branch: master
  • Size: 902 KB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created over 5 years ago · Last pushed over 1 year ago
Metadata Files
Readme License

ReadMe.md

How To Run CharacteriseShape.py

These instructions assume running on macOS.

Install Packages

  1. If you already have python3 and numpy, scipy, matplotlib, astropy, openCV, and scikit-image, skip this section.
  2. Open the macOS Terminal app.
  3. Install Homebrew package manager https://brew.sh - enter the following in the command line /usr/bin/ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)"
  4. Install python3 by running the following in the terminal brew install python3
  5. Install required packages by entering the following: pip3 install numpy; pip3 install matplotlib; pip3 install astropy; pip3 install scipy; pip3 scikit-image; pip3 install opencv-python.

Run script

  1. Open the Terminal application.
  2. Change working directory to the location of the CharacteriseShape.py script. Eg. if the script is located at /Users/christopher/Desktop/CharacteriseShape, enter cd /Users/christopher/Desktop/CharacteriseShape.
  3. Identify the location of the image file to be analysed. Eg. /Users/christopher/Desktop/image.tif.
  4. Run the script by entering the following: python3 CharacteriseShape.py <filename>. For example, python3 CharacteriseShape.py /Users/christopher/Desktop/image.tif

Owner

  • Name: Christopher Revell
  • Login: chris-revell
  • Kind: user
  • Location: UK
  • Company: University of Manchester

Postdoctoral associate, Department of Mathematics, University of Manchester.

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