https://github.com/ciela-institute/tarp

Coverage tests to check the quality of your posterior estimators.

https://github.com/ciela-institute/tarp

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
    Links to: arxiv.org
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (12.7%) to scientific vocabulary

Keywords

bayesian-inference statistics
Last synced: 5 months ago · JSON representation

Repository

Coverage tests to check the quality of your posterior estimators.

Basic Info
  • Host: GitHub
  • Owner: Ciela-Institute
  • License: mit
  • Language: Python
  • Default Branch: main
  • Homepage: https://tarp.readthedocs.io/
  • Size: 295 KB
Statistics
  • Stars: 32
  • Watchers: 5
  • Forks: 8
  • Open Issues: 2
  • Releases: 3
Topics
bayesian-inference statistics
Created almost 3 years ago · Last pushed over 1 year ago
Metadata Files
Readme License

README.md

tarp

Documentation Status PyPI version Tests Coverage

tarp is a small python package for performing statistical coverage tests to assess the quality of posterior estimators. <!-- tarp is framework-agnostic: it works with posterior estimators and samplers written in numpy, pytorch, jax. -->

tarp currently implements the distance to random point (DRP) test introduced in Lemos, Coogan et al 2023, which relies on posterior samples.

Installation

pip install tarp

Contributing

Please reach out to us if you're interested in contributing!

To start, follow the installation instructions, replacing the last line with bash pip install -e ".[dev]" This creates an editable install and installs the dev dependencies for generating docs, running tests and packaging for PyPI.

Please use isort and black to format your code. Open up issues for bugs/missing features. Use pull requests for additions to the code. Write tests that can be run by pytest.

Owner

  • Name: Ciela-Institute
  • Login: Ciela-Institute
  • Kind: organization

GitHub Events

Total
  • Watch event: 5
  • Pull request event: 1
  • Fork event: 3
Last Year
  • Watch event: 5
  • Pull request event: 1
  • Fork event: 3

Committers

Last synced: over 1 year ago

All Time
  • Total Commits: 47
  • Total Committers: 4
  • Avg Commits per committer: 11.75
  • Development Distribution Score (DDS): 0.489
Past Year
  • Commits: 19
  • Committers: 3
  • Avg Commits per committer: 6.333
  • Development Distribution Score (DDS): 0.316
Top Committers
Name Email Commits
Adam Coogan d****n@g****m 24
Pablo-Lemos p****1@g****m 17
EnceladeCandy n****a@u****a 5
Pablo Lemos 3****s 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 4
  • Total pull requests: 8
  • Average time to close issues: about 1 month
  • Average time to close pull requests: about 1 month
  • Total issue authors: 3
  • Total pull request authors: 5
  • Average comments per issue: 2.0
  • Average comments per pull request: 1.0
  • Merged pull requests: 7
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 2
  • Average time to close issues: N/A
  • Average time to close pull requests: about 1 hour
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.5
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • psteinb (2)
  • changhoonhahn (1)
  • voetberg (1)
Pull Request Authors
  • Pablo-Lemos (4)
  • arrjon (2)
  • psteinb (2)
  • RonanLegin (2)
  • EnceladeCandy (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

.github/workflows/coverage.yaml actions
  • actions/checkout v3 composite
  • actions/setup-python v4 composite
  • codecov/codecov-action v3 composite
.github/workflows/python-app.yml actions
  • actions/checkout v3 composite
  • actions/setup-python v4 composite
pyproject.toml pypi
  • numpy *
requirements.txt pypi
  • Sphinx ==5.3.0
  • deprecation ==2.1.0
  • furo ==2022.12.7
  • jax ==0.4.4
  • jaxlib ==0.4.4
  • myst-parser ==0.18.1
  • numpy ==1.24.2
  • sphinx-pyproject ==0.1.0
  • sphinx_autodoc_typehints ==1.22
  • torch ==1.13.1
  • tqdm ==4.65.0
setup.py pypi