grapesAgri1
grapesAgri1: Collection of Shiny Apps for Data Analysis in Agriculture - Published in JOSS (2021)
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Published in Journal of Open Source Software
Repository
Collection of shiny apps for Agricultural research Data Analysis. Allows user to have graphical user interface to perform analysis of Agricultural experimental data. On using the functions in this package a Graphical User Interface will pop up. Apps Works by simple upload of files in CSV format.
Basic Info
- Host: GitHub
- Owner: pratheesh3780
- License: gpl-3.0
- Language: R
- Default Branch: master
- Size: 8.52 MB
Statistics
- Stars: 1
- Watchers: 1
- Forks: 1
- Open Issues: 1
- Releases: 4
Metadata Files
README.md
grapesAgri1: Collection of shiny applications for data analysis in Agriculture-Part 1 
General R-shiny based Analysis Platform Empowered by Statistics in Agriculture part-1 (grapesAgri1)
R-Package for Data Analysis in Agriculture.
Version : 0.1.0; Copyright (C) 2021-2025: Kerala Agricultural University; License: GPL-3
Gopinath, P. P.1, Parsad, R.2, Joseph, B.1, Adarsh, V.S.3
- Department of Agricultural Statistics, College of Agriculture, Vellayani, Kerala Agricultural Univesity.
- ICAR-Indian Agricultural Statistics Research Institute, New Delhi.
- Department of Agricultural Statistics, BCKV, West Bengal
Introduction
Installation
The package can be installed from CRAN as follows:
``` r
Install from CRAN
install.packages('grapesAgri1', dependencies=TRUE) ```
The development version can be installed from github as follows:
``` r
Install grapesAgri1 development version from Github using the code below:
if (!require('devtools')) install.packages('devtools') devtools::install_github("pratheesh3780/grapesAgri1") ```
usage
r
grapesAgri1::descApp() # descriptive Statistics and Visualization
grapesAgri1::corrApp() # Correlation Analysis
grapesAgri1::ttApp() # Compare Means
grapesAgri1::crdApp() # Completely Randomized Design
grapesAgri1::layoutApp() # Field layout of experiments
grapesAgri1::rbdApp() # Randomized Block Design
Apps included in the package
|Sl. No.| App Title | Function to call |Remark | |:-----:| :----------- | :-----------:|:----------------| |1|Descriptive Statistics and Visualization | descApp() |Summary Statistics, Summary Statistics by Group, Box plot, Histogram, Q-Q plot and Shapiro-Wilk's test| |2|Correlation Analysis | corrApp() | Simple correlation, Correlation Matrix, correlogram and scatterplot| |3|Compare Means: Small samle tests | ttApp() | One sample t-test, Two sample unpaired t-test, paired t-test, Two sample unpaired Welch t-test, F test, Box plot, Paired Plot| |4|Completely Randomized Design | crdApp() |One-way Analysis of variance (equal and unequal replication), Multiple comparison test, boxplot and barchart with confidence interval| |5|Field layout of experiments | layoutApp() |Field layout of following designs can be obtained: Completely Randomized Design (CRD), Randomized Complete Block Design (RCBD), Split-plot design, Strip-plot design, Augmented RCBD| |6|Randomized Block Design | rbdApp() |Two-way Analysis of variance, Multiple comparison test, boxplot and barchart with confidence interval|
Further Reading
To know more about analysis tools included in the package see the following links 1. Design and Analysis of experiments. 2. Correlation Analysis. 3. Hypothesis Testing. 4. Descriptive statistics and Exploratory data analysis. 5. Test for significance.
Glimpse to grapesAgri1 in Action!
It is very user friendly. Just upload your file in CSV format.
Note: we apologize that in grapesAgri1 version 1.0.0 in CRAN you may not be able to download model data set in crdApp()and rbdApp(). Issue will be cleared in the version 1.1.0 releasing by next month. You can instead download from github where the issue is resolved.
Thank You
See below for some random images of GUI of grapesAgri1








Community guidelines
Report Issues:
- Questions, feedback, bug reports: please open an issue in the issue tracker of the project.
Contribution to the software:
- Please open an issue in the issue tracker of the project that describes the changes you would like to make to the software and open a pull request with the changes. The description of the pull request must reference the corresponding issue.
Owner
- Login: pratheesh3780
- Kind: user
- Location: Kerala
- Company: Kerala Agricultural University
- Website: www.kaugrapes.com
- Repositories: 4
- Profile: https://github.com/pratheesh3780
Assistant Professor of Statistics at Kerala Agricultural University
JOSS Publication
grapesAgri1: Collection of Shiny Apps for Data Analysis in Agriculture
Authors
Department of Agricultural Statistics, College of Agriculture, Vellayani, Kerala Agricultural University, Kerala, India.
ICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Department of Agricultural Statistics, College of Agriculture, Vellayani, Kerala Agricultural University, Kerala, India.
Department of Agricultural Statistics, BCKV, West Bengal, India
Tags
Data analysis in Agriculture shiny app Design of experiments Compare means Field Layout Correlation Analysis Descriptive StatisticsGitHub Events
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| Name | Commits | |
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| pratheesh3780 | p****i@g****m | 195 |
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| Eli Miller | e****a@g****m | 1 |
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- Total issue authors: 3
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- Average comments per issue: 5.4
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Top Labels
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Dependencies
- Hmisc >= 4.5.0 imports
- PairedData >= 1.1.1 imports
- RColorBrewer >= 1.1.2 imports
- Rdpack >= 2.1.2 imports
- agricolae >= 1.3.5 imports
- corrplot >= 0.84 imports
- desplot >= 1.8 imports
- dplyr >= 1.0.4 imports
- ggplot2 >= 3.3.3 imports
- ggpubr >= 0.4.0 imports
- gridGraphics >= 0.5.1 imports
- gtools >= 3.9.2 imports
- kableExtra >= 1.3.4 imports
- knitr >= 1.31 imports
- magrittr >= 2.0.1 imports
- pastecs >= 1.3.21 imports
- reshape2 >= 1.4.4 imports
- rmarkdown >= 2.7 imports
- shiny >= 1.6.0 imports
- shinyWidgets >= 0.6.0 imports
- summarytools >= 0.9.9 imports
- datasets * suggests
- grid * suggests
- shinytest * suggests
- testthat * suggests
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/upload-artifact main composite
- r-lib/actions/setup-pandoc master composite
- r-lib/actions/setup-r master composite