Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/cjgeyer/bernor

Bernoulli Regression with Normal Random Effects (R package, not on CRAN)

https://github.com/cjgeyer/bernor

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.0%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

Bernoulli Regression with Normal Random Effects (R package, not on CRAN)

Basic Info
  • Host: GitHub
  • Owner: cjgeyer
  • Language: R
  • Default Branch: master
  • Size: 331 KB
Statistics
  • Stars: 2
  • Watchers: 3
  • Forks: 2
  • Open Issues: 1
  • Releases: 0
Created about 12 years ago · Last pushed about 1 year ago
Metadata Files
Readme

README.md

R package to do logit-normal generalized linear mixed models.

Method: ordinary Monte Carlo with importance sampling.

The main point of the package was to provide the computing backing the paper

Sung, Y. J. and Geyer, C. J. (2007).\ Monte Carlo likelihood inference for missing data models.\ Annals of Statistics, 35, 990--1011.

The package works fine (although is a bit complicated to use) and does random effects models of arbitrary complexity. However, its importance sampling scheme is not ideal and it does not give very good answers for very complicated models. Hence we have not put the package on CRAN.

Should install with no problem. Passed R CMD check under R-3.5.1. The latest version uses all of the native routine registration recommended by Sections 5.4 and 6.1 of Writing R Extensions (https://cran.r-project.org/doc/manuals/r-release/R-exts.html).

To install using R package remotes (https://cran.r-project.org/package=remotes)

library(remotes)
install_github("cjgeyer/bernor", subdir = "package/bernor")

Owner

  • Name: Charles J. Geyer
  • Login: cjgeyer
  • Kind: user
  • Location: Minneapolis, Minnesota, USA
  • Company: University of Minnesota School of Statistics

I am a professor in the School of Statistics, University of Minnesota. Most repos here are R packages, some for CRAN and some for teaching.

GitHub Events

Total
  • Push event: 1
Last Year
  • Push event: 1

Dependencies

package/bernor/DESCRIPTION cran
  • R >= 3.0.2 depends