Recent Releases of https://github.com/clima/parameterestimocean.jl

https://github.com/clima/parameterestimocean.jl - v0.14.3

ParameterEstimocean v0.14.3

Diff since v0.14.2

Merged pull requests: - Bessel-corrected std in ZScore transformation (#292) (@adelinehillier) - Update CompatHelper.yml (#305) (@navidcy) - Update CompatHelper.yml (#306) (@navidcy) - Update Project.toml (#310) (@glwagner) - Bump to 0.14.3 (#311) (@glwagner)

- Julia
Published by github-actions[bot] over 3 years ago

https://github.com/clima/parameterestimocean.jl - v0.14.2

ParameterEstimocean v0.14.2

Diff since v0.14.1

Merged pull requests: - Docstrings + more tests (#299) (@navidcy) - Various updates (#303) (@glwagner) - Bump to 0.14.2 (#304) (@glwagner)

- Julia
Published by github-actions[bot] over 3 years ago

https://github.com/clima/parameterestimocean.jl - v0.14.1

ParameterEstimocean v0.14.1

Diff since v0.14.0

Closed issues: - Missing import of PseudoSteppingSchemes.adaptive_step_parameters? (#300)

Merged pull requests: - Update Oceananigans v0.78.2 (#301) (@navidcy)

- Julia
Published by github-actions[bot] over 3 years ago

https://github.com/clima/parameterestimocean.jl - v0.14.0

ParameterEstimocean v0.14.0

Diff since v0.13.1

Closed issues: - Should IterationSummary be done after the iteration? (#115) - Observation noise uncertainty (#120) - Set correct initial conditions for fields excluded from calibration (#153) - Is the forward transform (transform to unconstrained space) wrong for ConstrainedNormal? (#160) - Rescaling Normal(mu, sig) by 1/abs(mu) is undefined when mu=0 (#173) - We need a separate docs repository (#231) - Store pre-computed inv(Γy) and inv(sqrt(Γy)) somewhere in EnsembleKalmanInversions object. (#245) - Is this line redundant? (#267) - "Dependent parameters" feature for FreeParameters (#269) - More general failure criteria (#272) - incremental compilation error (#275) - Duplicate method definition (#278) - Last face on z-grid should be grid.zᵃᵃᶠ[grid.Nz+1] (#296)

Merged pull requests: - Implement options for pseudo-time stepping (#243) (@adelinehillier) - Update EnsembleKalmanProcesses (#264) (@navidcy) - Update Oceananigans v0.76.1 (#266) (@navidcy) - Remove redundant variable definition (#268) (@navidcy) - BatchedSyntheticObservations with optional weights (#270) (@glwagner) - Implement dependent parameters feature for FreeParameters (#271) (@glwagner) - Primitive user API for particle failure condition (#273) (@glwagner) - Fix incremental compilation error for NormExceedsMedian (#276) (@navidcy) - Deploy Docs to CliMA/ParameterEstimoceanDocumentation repo (#277) (@navidcy) - Drop duplicate method definition (#279) (@navidcy) - Give Doc Preview Cleanup access to CliMA/ParameterEstimoceanDocumentation (#281) (@navidcy) - Update doc urls (#282) (@navidcy) - Try again to give Doc Preview Cleanup access to CliMA/ParameterEstimoceanDocumentation (#283) (@navidcy) - Yet try again to give Doc Preview Cleanup access to CliMA/ParameterEstimoceanDocumentation (#284) (@navidcy) - Bring back baroclinic adjustment example (#286) (@navidcy) - Remove blood reference from README (#287) (@navidcy) - Fix secrets for GitHub actions (#288) (@navidcy) - Fix RescaledZScore (#289) (@adelinehillier) - BatchedInverseProblem for multi-resolution and multi-simulation calibration (#291) (@glwagner) - Typo fix (#293) (@adelinehillier) - Distributed ensemble simulations (#295) (@glwagner) - Proper z_domain construction in drop_y_dimension (#297) (@navidcy) - Adds compat entry for Distributions + updates deps (#298) (@navidcy)

- Julia
Published by github-actions[bot] over 3 years ago

https://github.com/clima/parameterestimocean.jl - 🎉 v0.13.1

ParameterEstimocean v0.13.1

Diff since v0.13.0

Closed issues: - Register package (#71) - Nuke these? (#187) - Should we register ParameterEstimocean in the Julia general registry? (#251)

Merged pull requests: - Alternative normalization for Normally distributed parameters? (#250) (@glwagner) - Prepare package for registration with Julia Registries (#252) (@navidcy) - Bump up patch release before register package (#254) (@navidcy) - Add compat entry for Julia (#255) (@navidcy)

- Julia
Published by github-actions[bot] about 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.13.0

What's Changed

  • Merge ah/calibrate into glw/pseudotime by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/241
  • Update to latest Oceananigans and use RiBasedVerticalDiffusivity in examples by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/237
  • Tracking pseudotime and interface for PseudoSteppingSchemes by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/240
  • Mention Climate Modeling Alliance in Project.toml and README by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/246
  • Subtract variance when transforming Normally-distributed parameters by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/249
  • Alternative normalization for Normally distributed parameters? by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/250

Full Changelog: https://github.com/CliMA/ParameterEstimocean.jl/compare/v0.12.0...v0.13.0

- Julia
Published by navidcy about 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.12.0

What's Changed

  • Changes package name to ParameterEstimocean by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/234
  • Implement ConcatenatedVectorNormMap + develop projects/OceanBoundaryLayerParameterizations by @adelinehillier in https://github.com/CliMA/ParameterEstimocean.jl/pull/167
  • Bump to 0.12.0 by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/238

Full Changelog: https://github.com/CliMA/ParameterEstimocean.jl/compare/v0.11.0...v0.12.0

- Julia
Published by navidcy about 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.11.0

What's Changed

  • Change package name to OceanLearning.jl by @glwagner in https://github.com/CliMA/OceanLearning.jl/pull/226
  • Bump version after new OceanLearning.jl name by @navidcy in https://github.com/CliMA/OceanLearning.jl/pull/227

Full Changelog: https://github.com/CliMA/OceanLearning.jl/compare/v0.10.2...v0.11.0

- Julia
Published by navidcy about 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.10.2

What's Changed

  • Remove StatProfilerHTML dependency by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/221
  • Use Oceananigans v0.71.6 by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/222
  • Extends regridding capabilities a bit by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/225

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.10.1...v0.10.2

- Julia
Published by navidcy about 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.10.1

What's Changed

  • Show actual value of convergence_rate by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/215
  • forward_map_names feature and attempts to calibrate baroclinic adjustment channel by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/217
  • Verify data collection in forward_map by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/220
  • Use Oceananigans v0.71.1 by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/218

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.10.0...v0.10.1

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.10.0

What's Changed

  • Adds initialize_simulation! property in InverseProblem by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/212
  • New update ensemble method + adaptive time-stepping by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/214

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.9.0...v0.10.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.9.0

What's Changed

  • Miscellaneous updates as calibration continues by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/185
  • Moar docstrings by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/186
  • Adds Transform tests for weighting by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/188
  • Perfect catke calibration fix by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/189
  • Convert Int to UnitRange in Time/SpaceIndices by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/194
  • Adding a docstring to Transformation by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/193
  • Makes Perfect CATKE example cheaper by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/192
  • Adds docstring in core-function inside Parameters module by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/197
  • Tiny improvements to the ensemble simulation constructor by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/178
  • Restructuring of Docs by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/200
  • Use latest Oceananigans with prettytime shenanigans by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/203
  • Docs don't need ElectronDisplay by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/201
  • Properly export functions from submodules by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/199
  • Fix prettyvector which is used in show(io, ::SyntheticObservations) by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/205
  • Some clean up of some suppressions by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/209
  • Zero out time series tendency data !! by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/210

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.8.0...v0.9.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.8.0

What's Changed

  • Some fixes in the perfect baroclinic adjustment calibration example by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/180
  • Delete bug_test.jl by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/181
  • More resampler tests... by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/183
  • Adds some tests for Transformations by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/182
  • Better latex rendering + update installation instructions in Docs by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/184

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.7.0...v0.8.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.7.0

What's Changed

  • Calibrate IsopycnalSkewSymmetricDiffusivity in eddying channel by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/159
  • Update README.md by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/162
  • Priors API refactor by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/161
  • Fixes bug in dropydimension by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/166
  • Add tests for evaluating forward maps with LESbrary-derived SyntheticObservations by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/172
  • Debugging "persistent failed parameters" by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/168
  • CompatHelper: add new compat entry for SpecialFunctions at version 2, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/171
  • Example that explores specifying priors by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/174
  • Calibrate GM on channel by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/165
  • CompatHelper: bump compat for SpecialFunctions to 2, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/176
  • Calibrate GM on baroclinic adjustment problem by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/175
  • Introducing Transformation encompassing normalization, time slicing/weighting, and space slicing/weighting by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/177
  • Bump to 0.7.0 by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/179

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.6.0...v0.7.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.6.0

What's Changed

  • Remove Codecov annotations by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/155
  • More general Resampler by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/154

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.5.1...v0.6.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.5.1

What's Changed

  • Five case calibration "example" and a few GPU fixes by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/150

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.5.0...v0.5.1

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.5.0

What's Changed

  • RescaledZScore normalization by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/148
  • Add LESbrary data with 1m vertical resolution by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/151

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.4.0...v0.5.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.4.0

What's Changed

  • LESbrary calibration example + refactor iterate! by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/128
  • CompatHelper: add new compat entry for DataDeps at version 0.7, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/144
  • Update docstrings by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/142
  • Fix scoping issues in SyntheticObservations constructor by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/143
  • Add DataDep links to four- and six-day suites by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/145
  • Fix regrid bug in SyntheticObservations by @adelinehillier in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/146

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.3.0...v0.4.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.3.0

What's Changed

  • Correct visual in perfect catke calibration example by @adelinehillier in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/122
  • Fix limits in scatter and pdf figure for CATKE perfect model calibration by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/121
  • Implements NaNResampler by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/102
  • Bump minor by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/126
  • Upgrade to latest Oceananigans and get running on the GPU by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/123
  • Add back compat entries by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/139
  • Brings back commented out literated examples by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/140
  • Update packages by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/141

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.2.0...v0.3.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.2.0

What's Changed

  • Adds metadata + Zenodo by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/93
  • Delete visualize_distributions.jl by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/98
  • CompatHelper: bump compat for CUDA to 3, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/94
  • Correction: install via github by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/99
  • Rename transform_observations -> transform_time_series and OneDimensionalTimeSeries -> SyntheticObservations by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/103
  • Minor code formatting by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/106
  • Minor fix for IterationSummary by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/105
  • Tests for closure_with_parameters and update_closure_ensemble_member! by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/107
  • Adds a parameter_ensemble utility by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/108
  • Update README.md by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/112
  • Fix iteration counting by iterate! by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/111
  • Update dependencies by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/114
  • Fix bug when running forward_map twice by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/117
  • Updates to the hidden example scripts by @adelinehillier in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/116
  • CompatHelper: add new compat entry for FileIO at version 1, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/119
  • CompatHelper: add new compat entry for StatProfilerHTML at version 1, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/118
  • Perfect calibration of CATKE by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/100

Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.1.0...v0.2.0

- Julia
Published by navidcy over 4 years ago

https://github.com/clima/parameterestimocean.jl - v0.1.0

The first tagged release (pre-registration).

- Julia
Published by navidcy over 4 years ago