Recent Releases of https://github.com/clima/parameterestimocean.jl
https://github.com/clima/parameterestimocean.jl - v0.14.3
ParameterEstimocean v0.14.3
Merged pull requests: - Bessel-corrected std in ZScore transformation (#292) (@adelinehillier) - Update CompatHelper.yml (#305) (@navidcy) - Update CompatHelper.yml (#306) (@navidcy) - Update Project.toml (#310) (@glwagner) - Bump to 0.14.3 (#311) (@glwagner)
- Julia
Published by github-actions[bot] over 3 years ago
https://github.com/clima/parameterestimocean.jl - v0.14.2
ParameterEstimocean v0.14.2
Merged pull requests: - Docstrings + more tests (#299) (@navidcy) - Various updates (#303) (@glwagner) - Bump to 0.14.2 (#304) (@glwagner)
- Julia
Published by github-actions[bot] over 3 years ago
https://github.com/clima/parameterestimocean.jl - v0.14.1
ParameterEstimocean v0.14.1
Closed issues:
- Missing import of PseudoSteppingSchemes.adaptive_step_parameters? (#300)
Merged pull requests: - Update Oceananigans v0.78.2 (#301) (@navidcy)
- Julia
Published by github-actions[bot] over 3 years ago
https://github.com/clima/parameterestimocean.jl - v0.14.0
ParameterEstimocean v0.14.0
Closed issues:
- Should IterationSummary be done after the iteration? (#115)
- Observation noise uncertainty (#120)
- Set correct initial conditions for fields excluded from calibration (#153)
- Is the forward transform (transform to unconstrained space) wrong for ConstrainedNormal? (#160)
- Rescaling Normal(mu, sig) by 1/abs(mu) is undefined when mu=0 (#173)
- We need a separate docs repository (#231)
- Store pre-computed inv(Γy) and inv(sqrt(Γy)) somewhere in EnsembleKalmanInversions object. (#245)
- Is this line redundant? (#267)
- "Dependent parameters" feature for FreeParameters (#269)
- More general failure criteria (#272)
- incremental compilation error (#275)
- Duplicate method definition (#278)
- Last face on z-grid should be grid.zᵃᵃᶠ[grid.Nz+1] (#296)
Merged pull requests:
- Implement options for pseudo-time stepping (#243) (@adelinehillier)
- Update EnsembleKalmanProcesses (#264) (@navidcy)
- Update Oceananigans v0.76.1 (#266) (@navidcy)
- Remove redundant variable definition (#268) (@navidcy)
- BatchedSyntheticObservations with optional weights (#270) (@glwagner)
- Implement dependent parameters feature for FreeParameters (#271) (@glwagner)
- Primitive user API for particle failure condition (#273) (@glwagner)
- Fix incremental compilation error for NormExceedsMedian (#276) (@navidcy)
- Deploy Docs to CliMA/ParameterEstimoceanDocumentation repo (#277) (@navidcy)
- Drop duplicate method definition (#279) (@navidcy)
- Give Doc Preview Cleanup access to CliMA/ParameterEstimoceanDocumentation (#281) (@navidcy)
- Update doc urls (#282) (@navidcy)
- Try again to give Doc Preview Cleanup access to CliMA/ParameterEstimoceanDocumentation (#283) (@navidcy)
- Yet try again to give Doc Preview Cleanup access to CliMA/ParameterEstimoceanDocumentation (#284) (@navidcy)
- Bring back baroclinic adjustment example (#286) (@navidcy)
- Remove blood reference from README (#287) (@navidcy)
- Fix secrets for GitHub actions (#288) (@navidcy)
- Fix RescaledZScore (#289) (@adelinehillier)
- BatchedInverseProblem for multi-resolution and multi-simulation calibration (#291) (@glwagner)
- Typo fix (#293) (@adelinehillier)
- Distributed ensemble simulations (#295) (@glwagner)
- Proper z_domain construction in drop_y_dimension (#297) (@navidcy)
- Adds compat entry for Distributions + updates deps (#298) (@navidcy)
- Julia
Published by github-actions[bot] over 3 years ago
https://github.com/clima/parameterestimocean.jl - 🎉 v0.13.1
ParameterEstimocean v0.13.1
Closed issues: - Register package (#71) - Nuke these? (#187) - Should we register ParameterEstimocean in the Julia general registry? (#251)
Merged pull requests:
- Alternative normalization for Normally distributed parameters? (#250) (@glwagner)
- Prepare package for registration with Julia Registries (#252) (@navidcy)
- Bump up patch release before register package (#254) (@navidcy)
- Add compat entry for Julia (#255) (@navidcy)
- Julia
Published by github-actions[bot] about 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.13.0
What's Changed
- Merge ah/calibrate into glw/pseudotime by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/241
- Update to latest Oceananigans and use
RiBasedVerticalDiffusivityin examples by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/237 - Tracking pseudotime and interface for PseudoSteppingSchemes by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/240
- Mention Climate Modeling Alliance in Project.toml and README by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/246
- Subtract variance when transforming Normally-distributed parameters by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/249
- Alternative normalization for
Normally distributed parameters? by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/250
Full Changelog: https://github.com/CliMA/ParameterEstimocean.jl/compare/v0.12.0...v0.13.0
- Julia
Published by navidcy about 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.12.0
What's Changed
- Changes package name to ParameterEstimocean by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/234
- Implement
ConcatenatedVectorNormMap+ developprojects/OceanBoundaryLayerParameterizationsby @adelinehillier in https://github.com/CliMA/ParameterEstimocean.jl/pull/167 - Bump to 0.12.0 by @glwagner in https://github.com/CliMA/ParameterEstimocean.jl/pull/238
Full Changelog: https://github.com/CliMA/ParameterEstimocean.jl/compare/v0.11.0...v0.12.0
- Julia
Published by navidcy about 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.11.0
What's Changed
- Change package name to
OceanLearning.jlby @glwagner in https://github.com/CliMA/OceanLearning.jl/pull/226 - Bump version after new OceanLearning.jl name by @navidcy in https://github.com/CliMA/OceanLearning.jl/pull/227
Full Changelog: https://github.com/CliMA/OceanLearning.jl/compare/v0.10.2...v0.11.0
- Julia
Published by navidcy about 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.10.2
What's Changed
- Remove
StatProfilerHTMLdependency by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/221 - Use Oceananigans v0.71.6 by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/222
- Extends regridding capabilities a bit by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/225
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.10.1...v0.10.2
- Julia
Published by navidcy about 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.10.1
What's Changed
- Show actual value of
convergence_rateby @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/215 forward_map_namesfeature and attempts to calibrate baroclinic adjustment channel by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/217- Verify data collection in
forward_mapby @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/220 - Use Oceananigans v0.71.1 by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/218
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.10.0...v0.10.1
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.10.0
What's Changed
- Adds
initialize_simulation!property inInverseProblemby @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/212 - New update ensemble method + adaptive time-stepping by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/214
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.9.0...v0.10.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.9.0
What's Changed
- Miscellaneous updates as calibration continues by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/185
- Moar docstrings by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/186
- Adds Transform tests for weighting by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/188
- Perfect catke calibration fix by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/189
- Convert Int to UnitRange in Time/SpaceIndices by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/194
- Adding a docstring to
Transformationby @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/193 - Makes Perfect CATKE example cheaper by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/192
- Adds docstring in core-function inside
Parametersmodule by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/197 - Tiny improvements to the ensemble simulation constructor by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/178
- Restructuring of Docs by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/200
- Use latest Oceananigans with prettytime shenanigans by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/203
- Docs don't need ElectronDisplay by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/201
- Properly export functions from submodules by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/199
- Fix
prettyvectorwhich is used inshow(io, ::SyntheticObservations)by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/205 - Some clean up of some suppressions by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/209
- Zero out time series tendency data !! by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/210
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.8.0...v0.9.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.8.0
What's Changed
- Some fixes in the perfect baroclinic adjustment calibration example by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/180
- Delete bug_test.jl by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/181
- More resampler tests... by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/183
- Adds some tests for Transformations by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/182
- Better latex rendering + update installation instructions in Docs by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/184
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.7.0...v0.8.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.7.0
What's Changed
- Calibrate
IsopycnalSkewSymmetricDiffusivityin eddying channel by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/159 - Update README.md by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/162
- Priors API refactor by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/161
- Fixes bug in dropydimension by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/166
- Add tests for evaluating forward maps with LESbrary-derived
SyntheticObservationsby @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/172 - Debugging "persistent failed parameters" by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/168
- CompatHelper: add new compat entry for SpecialFunctions at version 2, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/171
- Example that explores specifying priors by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/174
- Calibrate GM on channel by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/165
- CompatHelper: bump compat for SpecialFunctions to 2, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/176
- Calibrate GM on baroclinic adjustment problem by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/175
- Introducing
Transformationencompassing normalization, time slicing/weighting, and space slicing/weighting by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/177 - Bump to 0.7.0 by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/179
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.6.0...v0.7.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.6.0
What's Changed
- Remove Codecov annotations by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/155
- More general
Resamplerby @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/154
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.5.1...v0.6.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.5.1
What's Changed
- Five case calibration "example" and a few GPU fixes by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/150
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.5.0...v0.5.1
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.5.0
What's Changed
RescaledZScorenormalization by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/148- Add LESbrary data with 1m vertical resolution by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/151
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.4.0...v0.5.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.4.0
What's Changed
- LESbrary calibration example + refactor
iterate!by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/128 - CompatHelper: add new compat entry for DataDeps at version 0.7, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/144
- Update docstrings by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/142
- Fix scoping issues in SyntheticObservations constructor by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/143
- Add DataDep links to four- and six-day suites by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/145
- Fix regrid bug in
SyntheticObservationsby @adelinehillier in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/146
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.3.0...v0.4.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.3.0
What's Changed
- Correct visual in perfect catke calibration example by @adelinehillier in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/122
- Fix limits in scatter and pdf figure for CATKE perfect model calibration by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/121
- Implements NaNResampler by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/102
- Bump minor by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/126
- Upgrade to latest Oceananigans and get running on the GPU by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/123
- Add back compat entries by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/139
- Brings back commented out literated examples by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/140
- Update packages by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/141
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.2.0...v0.3.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.2.0
What's Changed
- Adds metadata + Zenodo by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/93
- Delete visualize_distributions.jl by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/98
- CompatHelper: bump compat for CUDA to 3, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/94
- Correction: install via github by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/99
- Rename
transform_observations->transform_time_seriesandOneDimensionalTimeSeries->SyntheticObservationsby @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/103 - Minor code formatting by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/106
- Minor fix for
IterationSummaryby @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/105 - Tests for
closure_with_parametersandupdate_closure_ensemble_member!by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/107 - Adds a
parameter_ensembleutility by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/108 - Update README.md by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/112
- Fix iteration counting by
iterate!by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/111 - Update dependencies by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/114
- Fix bug when running
forward_maptwice by @navidcy in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/117 - Updates to the hidden example scripts by @adelinehillier in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/116
- CompatHelper: add new compat entry for FileIO at version 1, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/119
- CompatHelper: add new compat entry for StatProfilerHTML at version 1, (keep existing compat) by @github-actions in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/118
- Perfect calibration of CATKE by @glwagner in https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/pull/100
Full Changelog: https://github.com/CliMA/OceanTurbulenceParameterEstimation.jl/compare/v0.1.0...v0.2.0
- Julia
Published by navidcy over 4 years ago
https://github.com/clima/parameterestimocean.jl - v0.1.0
The first tagged release (pre-registration).
- Julia
Published by navidcy over 4 years ago