https://github.com/clinical-infection-research-uosheffield/nasimmune_transcriptome
Code to reproduce analysis from a manuscript title "Mucosal and Blood Transcriptomes Differentiate Immune Responses Following Live-Attenuated Influenza Vaccination in Children"
https://github.com/clinical-infection-research-uosheffield/nasimmune_transcriptome
Science Score: 26.0%
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○CITATION.cff file
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✓.zenodo.json file
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○DOI references
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○Academic publication links
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.0%) to scientific vocabulary
Repository
Code to reproduce analysis from a manuscript title "Mucosal and Blood Transcriptomes Differentiate Immune Responses Following Live-Attenuated Influenza Vaccination in Children"
Basic Info
- Host: GitHub
- Owner: Clinical-Infection-Research-UoSheffield
- License: mit
- Language: R
- Default Branch: main
- Size: 4.88 KB
Statistics
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
nasimmune_transcriptome
Code to reproduce analysis from a manuscript title "Mucosal and Blood Transcriptomes Differentiate Immune Responses Following Live-Attenuated Influenza Vaccination in Children"
Contents
The directory contains:
- :file_folder: data: The raw input data files. Found here: .
- :file_folder: scripts: R scripts to be run in number order.
- :file_folder: output: All output generated from running the scripts. Included any modified data, figures, statistical analyses.
How to replicate analysis
This analysis requires R software and RStudio Desktop to be pre-installed.
- Clone this repository
- Open RStudio and create new project associated with this directory See here for details
- Download raw data (from: ) and save in /data folder
- Open each script in
./scriptsand run in number order
Owner
- Name: Clinical Infection Research UoSheffield
- Login: Clinical-Infection-Research-UoSheffield
- Kind: organization
- Email: ....@sheffield.ac.uk
- Location: United Kingdom
- Website: https://www.sheffield.ac.uk/smph/research/themes/infection-and-immunity
- Repositories: 1
- Profile: https://github.com/Clinical-Infection-Research-UoSheffield
Clinical-oriented research into Microorganisms, the Human body and Immunity internationally and in the UK
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