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Open Source Science

https://github.com/cloud-span/genomics03-using-the-command-line

Using the Command Line Interface

https://github.com/cloud-span/genomics03-using-the-command-line

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

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    CITATION.cff file
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    codemeta.json file
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    .zenodo.json file
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    DOI references
    Found 3 DOI reference(s) in README
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    Links to: zenodo.org
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    Scientific vocabulary similarity
    Low similarity (6.3%) to scientific vocabulary

Keywords

command-line shell shell-scripts
Last synced: 5 months ago · JSON representation

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Using the Command Line Interface

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command-line shell shell-scripts
Created over 4 years ago · Last pushed over 4 years ago

https://github.com/Cloud-SPAN/genomics03-using-the-command-line/blob/gh-pages/ 

[![Project Status: Active  The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5583050.svg)](https://doi.org/10.5281/zenodo.5583050)

# Genomics Session 2. Using the command line

Second session of the Cloud-SPANGenomics course.

Cloud-SPAN is a collaboration between the [Department of Biology, University of York](https://www.york.ac.uk/biology/) and [The Software Sustainability Institute](https://www.software.ac.uk/) funded by the UKRI innovation scholars award (Project Reference: [MR/V038680/1](https://www.google.com/url?q=https%3A%2F%2Fgtr.ukri.org%2Fprojects%3Fref%3DMR%252FV038680%252F1&sa=D&sntz=1&usg=AFQjCNF0nsozFp-1kvcp0Dgjks6kY8CiCQ)) which trains researchers, and the research software engineers that support them, to run specialised analyses on cloud-based high-performance computing infrastructure
The course is based on the Data Carpentrys[Genomics Workshop](https://datacarpentry.org/genomics-workshop), streamlined and extended to serve as the foundation course for the Cloud-SPAN advanced modules.The edited material is not endorsed by[Data Carpentry](https://datacarpentry.org/)orthe [Carpentries](https://carpentries.org/)in general.

Owner

  • Name: Cloud-SPAN
  • Login: Cloud-SPAN
  • Kind: organization
  • Email: cloud-span-project@york.ac.uk

Cloud-based High Performance Computing for SPecialised ANalyses on environmental 'omics

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Gemfile rubygems
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