clowder2

https://github.com/clowder-framework/clowder2 - v2.0.0-beta.3

Overview

License management
Release dataset with versions
Enable and disable user account through Keycloak
Jupyterhub integration
Interface for creating and editing matching criteria for triggering extractors
Interface for editing metadata definitions
My dataset tab listing all the datasets created by the user
Drag and drop upload multiple files
Footer with links to documentation, source code, and contact information
Documentation through MKDocs
Allow public datasets and files to be searchable
List all the extractors with the ability to enable/disable the extractors
Filter listeners based on their support for file or dataset
Helm chart updated to support custom existing secret
Allow public datasets and files to be searchable
List all the extractors with the ability to enable/disable the extractors
Filter listeners based on their support for file or dataset
Helm chart updated to support custom existing secret

In Depth Changes

Release/v2.0.0 beta2 by @longshuicy in https://github.com/clowder-framework/clowder2/pull/928
961 add footer for frontend pages by @longshuicy in https://github.com/clowder-framework/clowder2/pull/998
adding default value for admin in backend by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1000
Keycloak enabled change by @bingzhang in https://github.com/clowder-framework/clowder2/pull/973
implemented standard list of licenses by @ddey2 in https://github.com/clowder-framework/clowder2/pull/963
filters by file or dataset for listeners by @tcnichol in https://github.com/clowder-framework/clowder2/pull/970
fix typo in roles endpoint; disable sharing with myself by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1002
Material for Mkdocs docs by @lmarini in https://github.com/clowder-framework/clowder2/pull/962
996 detail information update on by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1001
953 postcss configuration by @longshuicy in https://github.com/clowder-framework/clowder2/pull/966
Delete dataset will also delete custom license by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1008
fix nested folder bug by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1024
Fix registration by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1006
removing alignment css by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1030
disabling next untill user selects a license by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1014
breadcrumb in the public components point to the wrong frontend routes by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1045
Docs to set up Clowder in VM by @Vismayak in https://github.com/clowder-framework/clowder2/pull/1005
List license and its url on public dataset by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1046
1020 modify extractor description UI by @Vismayak in https://github.com/clowder-framework/clowder2/pull/1048
adding license to populate fake data by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1051
Search needs to be case insensitive by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1049
Enable/disable listeners by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1022
1053 pagination doesnt update on deleting files in a dataset by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1060
Fixing logic to post metadata on file upload by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1054
866 readonly user by @tcnichol in https://github.com/clowder-framework/clowder2/pull/974
836 public search option by @tcnichol in https://github.com/clowder-framework/clowder2/pull/964
read only user can be made admin by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1079
fix precommits by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1083
add my datasets tab by @tcnichol in https://github.com/clowder-framework/clowder2/pull/965
Implement edit metadata definition by @ddey2 in https://github.com/clowder-framework/clowder2/pull/977
1061 filesystem UI component by @Vismayak in https://github.com/clowder-framework/clowder2/pull/1064
1066 index folders by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1090
1086 file UI component flag current files in datasets by @Vismayak in https://github.com/clowder-framework/clowder2/pull/1103
Implementation of feeds page by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1056
Added parameters field back to EventListenerDatasetJobMessage. by @lmarini in https://github.com/clowder-framework/clowder2/pull/1107
fix elasticsearch delete GH action by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1109
Removing version column from File entry view by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1117
1127 missing validator in some rjsf forms by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1128
Adding column for listener name to show on Analysis history by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1118
Removed snackbar message on clearing metadata form by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1113
Download should be incremented as soon as you click on downloads by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1120
1098 superamin messes up dataset pagination by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1104
918 ability to freeze datasets or version by @longshuicy in https://github.com/clowder-framework/clowder2/pull/941
users unable to search files by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1076
1069 show message when no metadata is present by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1112
added check for rendering step1 by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1116
1082 group is not updated after delete user by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1111
when revoke admin also revoke admin_mode by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1135
add generic superadmin flag to endpoints by @max-zilla in https://github.com/clowder-framework/clowder2/pull/1038
hide extracted results for now by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1138
removing left dividers by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1133
Integration of Jupyter through docker-compose by @Vismayak in https://github.com/clowder-framework/clowder2/pull/1088
Use the update flag when updating fields of existing Elasticsearch entry by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1136
1092 enhanced visualization layout by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1137
Remove install package from Pipfile since it doesn't exist anymore … by @lmarini in https://github.com/clowder-framework/clowder2/pull/1150
setting active to it's original value for existing extractor by @ddey2 in https://github.com/clowder-framework/clowder2/pull/1153
Fix extractor submission related bugs by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1154
1147 clowder 2 helm chart clean up by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1148
Docs updates by @lmarini in https://github.com/clowder-framework/clowder2/pull/1101
fix tests that are failing by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1167
Remove helm chart env by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1165
set workers based on recommended number of cores by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1170
Annotate image widget by @Vismayak in https://github.com/clowder-framework/clowder2/pull/1129
1168 add contents to docs by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1188
error message when sharing dataset with user by @tcnichol in https://github.com/clowder-framework/clowder2/pull/1140
Private extractor support by @max-zilla in https://github.com/clowder-framework/clowder2/pull/991
Fix/beta 3 extractions list by @lmarini in https://github.com/clowder-framework/clowder2/pull/1199
Fix/list dataset extractors list by @lmarini in https://github.com/clowder-framework/clowder2/pull/1200
When adding metadata, sometimes two instances of it would show up aft… by @lmarini in https://github.com/clowder-framework/clowder2/pull/1201
Rabbitmq host update to release name by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1203
Fix refresh token issue when using password flow by @GalMunGral in https://github.com/clowder-framework/clowder2/pull/1205
Fix edit file metadata bug by making sure by @lmarini in https://github.com/clowder-framework/clowder2/pull/1207
Fix/authenticated datasets access by @lmarini in https://github.com/clowder-framework/clowder2/pull/1210
Add endpoint for updating user info by @GalMunGral in https://github.com/clowder-framework/clowder2/pull/1206
Default to None if "owner" doesn't exists in msg by @lmarini in https://github.com/clowder-framework/clowder2/pull/1211
Use healthcheck to make sure elasticsearch has by @lmarini in https://github.com/clowder-framework/clowder2/pull/1212
Only show Create Feed button if in admin mode. by @lmarini in https://github.com/clowder-framework/clowder2/pull/1213
v2.0.0-beta3 by @longshuicy in https://github.com/clowder-framework/clowder2/pull/1151

New Contributors

@bingzhang made their first contribution in https://github.com/clowder-framework/clowder2/pull/973
@Vismayak made their first contribution in https://github.com/clowder-framework/clowder2/pull/1005
@GalMunGral made their first contribution in https://github.com/clowder-framework/clowder2/pull/1205

Full Changelog: https://github.com/clowder-framework/clowder2/compare/v2.0.0-beta.2...v2.0.0-beta.3

- TypeScript
Published by lmarini over 1 year ago

https://github.com/clowder-framework/clowder2 - v2.0.0-beta.2

What's Changed

Change hostname to edu by @longshuicy in https://github.com/clowder-framework/clowder2/pull/813
Have Message when there are no metadata definitions by @tcnichol in https://github.com/clowder-framework/clowder2/pull/766
804 move searchbox to top for metadata definition and group page by @longshuicy in https://github.com/clowder-framework/clowder2/pull/815
787 enable uploading multiple files at once by @tcnichol in https://github.com/clowder-framework/clowder2/pull/802
Basic implementation of admin in user collection in mongodb by @ddey2 in https://github.com/clowder-framework/clowder2/pull/809
message on new metadata entry by @tcnichol in https://github.com/clowder-framework/clowder2/pull/764
Adding check on client side for empty searchterm by @ddey2 in https://github.com/clowder-framework/clowder2/pull/821
getting rid of mongo init as beanie takes care of it by @ddey2 in https://github.com/clowder-framework/clowder2/pull/825
464 datasets visible to logged in users with AUTHENTICATED status by @tcnichol in https://github.com/clowder-framework/clowder2/pull/466
769 leveraging the heartbeat info to show extractor status by @longshuicy in https://github.com/clowder-framework/clowder2/pull/822
beta.1 release by @lmarini in https://github.com/clowder-framework/clowder2/pull/810
Adding admin dependency in authorization of dataset,files, metadata,search by @ddey2 in https://github.com/clowder-framework/clowder2/pull/819
Docs cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/829
Trying to fix readthedocs build with the addtion of .readthedocs.yaml. by @lmarini in https://github.com/clowder-framework/clowder2/pull/847
828 filter and sort extractors by livelihood by @longshuicy in https://github.com/clowder-framework/clowder2/pull/838
Register local files by @max-zilla in https://github.com/clowder-framework/clowder2/pull/816
824 display more information on the extractor popup by @longshuicy in https://github.com/clowder-framework/clowder2/pull/841
842 UI component for assign admin by @longshuicy in https://github.com/clowder-framework/clowder2/pull/845
allow message and heartbeat image and tag to be overwrite by @longshuicy in https://github.com/clowder-framework/clowder2/pull/858
Refactor create superadmin mode by @longshuicy in https://github.com/clowder-framework/clowder2/pull/851
need image tag for heartbeat and listeners by @tcnichol in https://github.com/clowder-framework/clowder2/pull/853
adding timeout loop for heartbeat and messages by @tcnichol in https://github.com/clowder-framework/clowder2/pull/860
hide files pagination on other tabs by @tcnichol in https://github.com/clowder-framework/clowder2/pull/863
779 dataset and file tabs cleanup by @tcnichol in https://github.com/clowder-framework/clowder2/pull/850
build the containers by @ddey2 in https://github.com/clowder-framework/clowder2/pull/889
844 toggle on and off of the extractor livelihood by @longshuicy in https://github.com/clowder-framework/clowder2/pull/869
892 latest main branch is not building the frontend image correct by @longshuicy in https://github.com/clowder-framework/clowder2/pull/893
861 bug when preferred username is not the email by @tcnichol in https://github.com/clowder-framework/clowder2/pull/862
add admin badge to avatar by @longshuicy in https://github.com/clowder-framework/clowder2/pull/880
implement if metadata is required for file and dataset by @ddey2 in https://github.com/clowder-framework/clowder2/pull/879
485 public datasets visible when not logged in by @tcnichol in https://github.com/clowder-framework/clowder2/pull/832
upgrade keycloak to v20 by @tcnichol in https://github.com/clowder-framework/clowder2/pull/897
add metadata button is back by @tcnichol in https://github.com/clowder-framework/clowder2/pull/888
Add external Keycloak functionality by @alemsh in https://github.com/clowder-framework/clowder2/pull/883
Hostname localhost by @longshuicy in https://github.com/clowder-framework/clowder2/pull/908
extractors removed from public, front end error fixed. by @tcnichol in https://github.com/clowder-framework/clowder2/pull/909
872 refactoring pagination by @longshuicy in https://github.com/clowder-framework/clowder2/pull/894
911 public dataset and file page still query private metadata endpoints by @tcnichol in https://github.com/clowder-framework/clowder2/pull/913
set up helm release by @longshuicy in https://github.com/clowder-framework/clowder2/pull/912
904 allow folder renaming by @longshuicy in https://github.com/clowder-framework/clowder2/pull/915
Pre commit autoformat by @lmarini in https://github.com/clowder-framework/clowder2/pull/846
change to make keycloak point to external url by @longshuicy in https://github.com/clowder-framework/clowder2/pull/942
929 message on empty page if there is no datasets by @tcnichol in https://github.com/clowder-framework/clowder2/pull/930
fix version blocking the datasets by @longshuicy in https://github.com/clowder-framework/clowder2/pull/950
enable superadmin does not update privileges by @tcnichol in https://github.com/clowder-framework/clowder2/pull/951
Fixed dataset parameters by @lmarini in https://github.com/clowder-framework/clowder2/pull/957
fix extractor bugs and deployment script bug by @longshuicy in https://github.com/clowder-framework/clowder2/pull/958
Drag and Drop One or More Files by @tcnichol in https://github.com/clowder-framework/clowder2/pull/935
clear more breakpoints and move role to the Details by @longshuicy in https://github.com/clowder-framework/clowder2/pull/968
remove analysis tab from authenticated file by @tcnichol in https://github.com/clowder-framework/clowder2/pull/972
style of the sharing table; link to the group/{group_id} page by @longshuicy in https://github.com/clowder-framework/clowder2/pull/967
tab can only use display none to hide by @longshuicy in https://github.com/clowder-framework/clowder2/pull/976
981 clowder2 register link on the topbar doesnt work by @longshuicy in https://github.com/clowder-framework/clowder2/pull/988
Hide register for now by @longshuicy in https://github.com/clowder-framework/clowder2/pull/990

New Contributors

@alemsh made their first contribution in https://github.com/clowder-framework/clowder2/pull/883

Full Changelog: https://github.com/clowder-framework/clowder2/compare/v2.0.0-beta.1...v2.0.0-beta.2

- TypeScript
Published by lmarini over 2 years ago

https://github.com/clowder-framework/clowder2 - v2.0.0-beta.1

What's Changed

170 add extractor to gui by @tcnichol in https://github.com/clowder-framework/clowder2/pull/184
236 style extractor page to match the mockup by @longshuicy in https://github.com/clowder-framework/clowder2/pull/242
Fix/docker compose by @lmarini in https://github.com/clowder-framework/clowder2/pull/247
Added dynamic context field w/ Autocomplete by @arunapa in https://github.com/clowder-framework/clowder2/pull/244
This will fix the issue with keycloak not connecting to postgres by @tcnichol in https://github.com/clowder-framework/clowder2/pull/257
Extractor registration fixes by @max-zilla in https://github.com/clowder-framework/clowder2/pull/250
241-error-on-delete-metadata fixed. by @tcnichol in https://github.com/clowder-framework/clowder2/pull/245
fix to deleting metadata in elasticsearch by @ddey2 in https://github.com/clowder-framework/clowder2/pull/249
added new fields to metadata by @ddey2 in https://github.com/clowder-framework/clowder2/pull/239
deleting metadata on file/dataset deletion by @ddey2 in https://github.com/clowder-framework/clowder2/pull/240
252 use rjsf to dynamically generate extractor parameter forms by @longshuicy in https://github.com/clowder-framework/clowder2/pull/256
Dockerize heartbeat by @tcnichol in https://github.com/clowder-framework/clowder2/pull/76
284 rabbitmq client configs should come from settings by @lmarini in https://github.com/clowder-framework/clowder2/pull/286
Removed unused Extract button on Dataset page. by @lmarini in https://github.com/clowder-framework/clowder2/pull/288
Initial roles and dependencies by @lmarini in https://github.com/clowder-framework/clowder2/pull/258
281 css style change when using rjsf by @longshuicy in https://github.com/clowder-framework/clowder2/pull/291
Update Pipfile.lock by @max-zilla in https://github.com/clowder-framework/clowder2/pull/308
Add extractor job ids by @max-zilla in https://github.com/clowder-framework/clowder2/pull/282
290 replace contents in metadata with content by @tcnichol in https://github.com/clowder-framework/clowder2/pull/292
Metdata version updated with metadata update by @ddey2 in https://github.com/clowder-framework/clowder2/pull/280
Add mime type feed support by @max-zilla in https://github.com/clowder-framework/clowder2/pull/305
276 automatically trigger extractor whenever a file is updated by @tcnichol in https://github.com/clowder-framework/clowder2/pull/279
Fix to file deletion by @ddey2 in https://github.com/clowder-framework/clowder2/pull/310
catch invalid date time by @longshuicy in https://github.com/clowder-framework/clowder2/pull/320
update file content model by @longshuicy in https://github.com/clowder-framework/clowder2/pull/322
document keycloak setting by @longshuicy in https://github.com/clowder-framework/clowder2/pull/315
fix smaller screen text overlapping issue by @longshuicy in https://github.com/clowder-framework/clowder2/pull/316
Updating byte size on updating file by @ddey2 in https://github.com/clowder-framework/clowder2/pull/325
Initial framework for groups by @ddey2 in https://github.com/clowder-framework/clowder2/pull/324
314 resubmit extractors with parameters on update file by @tcnichol in https://github.com/clowder-framework/clowder2/pull/323
272 show prior extractor executions on filedataset pages by @longshuicy in https://github.com/clowder-framework/clowder2/pull/327
Kubenetes add missing environment variables by @longshuicy in https://github.com/clowder-framework/clowder2/pull/297
311 add spinner and disable the upload button when upload files by @arunapa in https://github.com/clowder-framework/clowder2/pull/331
download older file versions & metadata by @max-zilla in https://github.com/clowder-framework/clowder2/pull/326
Adding download button on UI to download correct verison file by @ddey2 in https://github.com/clowder-framework/clowder2/pull/334
fix member typing by @longshuicy in https://github.com/clowder-framework/clowder2/pull/336
fixing error of blank page on submit file to extractor by @tcnichol in https://github.com/clowder-framework/clowder2/pull/338
Test for v1 extractor triggering by @max-zilla in https://github.com/clowder-framework/clowder2/pull/329
Added new component for file actions by @arunapa in https://github.com/clowder-framework/clowder2/pull/352
UI for displaying logs on extractors by @arunapa in https://github.com/clowder-framework/clowder2/pull/317
Properly interpret extractor statuses by @max-zilla in https://github.com/clowder-framework/clowder2/pull/356
Context matches v1 type. by @tcnichol in https://github.com/clowder-framework/clowder2/pull/328
Mongo views by @longshuicy in https://github.com/clowder-framework/clowder2/pull/353
Replaced EmbeddedSearch with custom search box component to fix session refresh issue by @arunapa in https://github.com/clowder-framework/clowder2/pull/365
Add File authorization framework by @max-zilla in https://github.com/clowder-framework/clowder2/pull/357
only get current version's metadata by @max-zilla in https://github.com/clowder-framework/clowder2/pull/363
Updated File Is Wrong Size by @tcnichol in https://github.com/clowder-framework/clowder2/pull/361
Added new Page Not Found component, updated route to use new component by @arunapa in https://github.com/clowder-framework/clowder2/pull/371
348 metadata value not visible on UI by @tcnichol in https://github.com/clowder-framework/clowder2/pull/362
changing context to list in metadata defs by @tcnichol in https://github.com/clowder-framework/clowder2/pull/370
Added group_id to authorization by @ddey2 in https://github.com/clowder-framework/clowder2/pull/354
add metadata auth framework. by @tcnichol in https://github.com/clowder-framework/clowder2/pull/359
adding restart unless stopped for this container by @tcnichol in https://github.com/clowder-framework/clowder2/pull/341
Implement FileAuthorization dependency by @max-zilla in https://github.com/clowder-framework/clowder2/pull/385
matching response type with actual dependency returns by @longshuicy in https://github.com/clowder-framework/clowder2/pull/390
add MetadataAuthorization dependency by @tcnichol in https://github.com/clowder-framework/clowder2/pull/387
Implement DatasetAuthorization dependency, add to endpoints by @tcnichol in https://github.com/clowder-framework/clowder2/pull/386
Group management by @max-zilla in https://github.com/clowder-framework/clowder2/pull/388
WIP: 351 add authorization to UI by @longshuicy in https://github.com/clowder-framework/clowder2/pull/389
Group management UI by @max-zilla in https://github.com/clowder-framework/clowder2/pull/393
Fixes 500 error when going back from group by @tcnichol in https://github.com/clowder-framework/clowder2/pull/404
401 group management UI continue by @longshuicy in https://github.com/clowder-framework/clowder2/pull/405
Added hyperlink to jobid, triggers log summary popup when clicked by @arunapa in https://github.com/clowder-framework/clowder2/pull/395
User api keys by @max-zilla in https://github.com/clowder-framework/clowder2/pull/402
374 add groups to datasets via gui by @tcnichol in https://github.com/clowder-framework/clowder2/pull/398
Add api key to getcurrentuser, catch missing auths by @max-zilla in https://github.com/clowder-framework/clowder2/pull/413
377 UI display group and user info right next to each of the resource by @tcnichol in https://github.com/clowder-framework/clowder2/pull/392
Sharing bugfixes by @max-zilla in https://github.com/clowder-framework/clowder2/pull/415
379 GitHub action to run codegen automatically when there is backend change by @longshuicy in https://github.com/clowder-framework/clowder2/pull/396
406 group management UI improvements by @longshuicy in https://github.com/clowder-framework/clowder2/pull/416
fix the search by @longshuicy in https://github.com/clowder-framework/clowder2/pull/421
job created timestamp wrong - fixed to local time by @tcnichol in https://github.com/clowder-framework/clowder2/pull/425
403 implement role change on shared tab by @tcnichol in https://github.com/clowder-framework/clowder2/pull/427
implement expires parameter for user keys by @max-zilla in https://github.com/clowder-framework/clowder2/pull/426
Moved Groups to sidebar, added breadcrumbs for group main page and individual group pages by @arunapa in https://github.com/clowder-framework/clowder2/pull/429
Metadata on new file version not updated by @arunapa in https://github.com/clowder-framework/clowder2/pull/431
Minor UI updates by @lmarini in https://github.com/clowder-framework/clowder2/pull/436
typo of aio-pika by @longshuicy in https://github.com/clowder-framework/clowder2/pull/460
442 UI to acquire api key by @longshuicy in https://github.com/clowder-framework/clowder2/pull/450
441 gui for create new group by @longshuicy in https://github.com/clowder-framework/clowder2/pull/445
Fixed the props for search component by @arunapa in https://github.com/clowder-framework/clowder2/pull/444
Autocomplete on sharing pop-ups by @max-zilla in https://github.com/clowder-framework/clowder2/pull/459
import container by @longshuicy in https://github.com/clowder-framework/clowder2/pull/462
446 gui to manage api keys by @longshuicy in https://github.com/clowder-framework/clowder2/pull/465
Sharing tab cleanup by @max-zilla in https://github.com/clowder-framework/clowder2/pull/430
Fix reload bug by @max-zilla in https://github.com/clowder-framework/clowder2/pull/451
461 fix library version in pipfile by @longshuicy in https://github.com/clowder-framework/clowder2/pull/468
443 frontend need to display more verbose backend error by @arunapa in https://github.com/clowder-framework/clowder2/pull/458
469 create profile page by @tcnichol in https://github.com/clowder-framework/clowder2/pull/471
Implemented role delete in sharing tab by @arunapa in https://github.com/clowder-framework/clowder2/pull/472
Show Creator on Group Page by @tcnichol in https://github.com/clowder-framework/clowder2/pull/428
Fixed bug where error detail might be empty by @arunapa in https://github.com/clowder-framework/clowder2/pull/478
486 list doesnt get populated immediately when successfully submitting share permissions by @arunapa in https://github.com/clowder-framework/clowder2/pull/488
476 add member need to filter out the creator by @longshuicy in https://github.com/clowder-framework/clowder2/pull/479
Upgrade minio rabbitmq related in helm chart by @longshuicy in https://github.com/clowder-framework/clowder2/pull/470
438 browser back on 403 page takes us to the dataset page we dont have access to by @arunapa in https://github.com/clowder-framework/clowder2/pull/487
format in local timezone by @longshuicy in https://github.com/clowder-framework/clowder2/pull/482
420 need to parse and return a consistent response from keycloak proxy by @longshuicy in https://github.com/clowder-framework/clowder2/pull/483
Search improvements & bug fixes by @max-zilla in https://github.com/clowder-framework/clowder2/pull/467
Modified metadata UI components to display required fields by @arunapa in https://github.com/clowder-framework/clowder2/pull/267
489 add a query parameter to redirect from login to the original page by @longshuicy in https://github.com/clowder-framework/clowder2/pull/510
506 frontend request refresh jwt token every minute by @longshuicy in https://github.com/clowder-framework/clowder2/pull/513
507 create datasets form improvements by @longshuicy in https://github.com/clowder-framework/clowder2/pull/515
Error running extractor on main by @tcnichol in https://github.com/clowder-framework/clowder2/pull/527
fix filter by status by @longshuicy in https://github.com/clowder-framework/clowder2/pull/529
447 send api key to extractor by @max-zilla in https://github.com/clowder-framework/clowder2/pull/473
download file version button hard to see by @longshuicy in https://github.com/clowder-framework/clowder2/pull/535
525 should show error message on frontend when user tries to add an unknown user to groups by @longshuicy in https://github.com/clowder-framework/clowder2/pull/532
Beanie by @lmarini in https://github.com/clowder-framework/clowder2/pull/424
537 improve readme by @sandeep-ps in https://github.com/clowder-framework/clowder2/pull/553
Remove advanced search toggle by @max-zilla in https://github.com/clowder-framework/clowder2/pull/561
Fix pytest failing upgrade cache action by @longshuicy in https://github.com/clowder-framework/clowder2/pull/564
Set the docker project name to `-p clowder2-dev when running the dev by @lmarini in https://github.com/clowder-framework/clowder2/pull/565
570 api key failed on frontend by @longshuicy in https://github.com/clowder-framework/clowder2/pull/571
only files not in folders show up at root level by @tcnichol in https://github.com/clowder-framework/clowder2/pull/567
549 example of viz component by @longshuicy in https://github.com/clowder-framework/clowder2/pull/557
Implement backend for visualization data by @ddey2 in https://github.com/clowder-framework/clowder2/pull/560
556 viz config for files by @tcnichol in https://github.com/clowder-framework/clowder2/pull/559
572 frontend visualization reading from viz config and viz data by @longshuicy in https://github.com/clowder-framework/clowder2/pull/573
Updating visualization download url by @ddey2 in https://github.com/clowder-framework/clowder2/pull/580
include vega and vega-lite by @longshuicy in https://github.com/clowder-framework/clowder2/pull/582
change models for visualizations by @tcnichol in https://github.com/clowder-framework/clowder2/pull/577
visualizationconfigid now in the visualization_data object by @tcnichol in https://github.com/clowder-framework/clowder2/pull/593
adding missing field by @tcnichol in https://github.com/clowder-framework/clowder2/pull/595
576 layout of multiple visualization by @longshuicy in https://github.com/clowder-framework/clowder2/pull/583
585 implement thumbnail by @longshuicy in https://github.com/clowder-framework/clowder2/pull/592
600 share should have its own menu by @tcnichol in https://github.com/clowder-framework/clowder2/pull/607
group description is now aligned left by @tcnichol in https://github.com/clowder-framework/clowder2/pull/606
enable visualization for dataset by @longshuicy in https://github.com/clowder-framework/clowder2/pull/605
fix logout by @tcnichol in https://github.com/clowder-framework/clowder2/pull/609
Geospatial Preview by @max-zilla in https://github.com/clowder-framework/clowder2/pull/568
fix adding non-existent user to group by @tcnichol in https://github.com/clowder-framework/clowder2/pull/608
Fixed submission to extractors in prod by @lmarini in https://github.com/clowder-framework/clowder2/pull/614
596 prettify the multi grid layout of the visualization by @longshuicy in https://github.com/clowder-framework/clowder2/pull/612
597 edit group name and description by @tcnichol in https://github.com/clowder-framework/clowder2/pull/611
Moving createFileMetadata so that it's called after a file update is successful by @ddey2 in https://github.com/clowder-framework/clowder2/pull/616
replace DateRange with two DatePickers by @max-zilla in https://github.com/clowder-framework/clowder2/pull/619
fix dataset submit after metadata by @tcnichol in https://github.com/clowder-framework/clowder2/pull/632
add messages extractor to github build so it can be pushed to docker.io by @longshuicy in https://github.com/clowder-framework/clowder2/pull/630
fix blank visualization by @tcnichol in https://github.com/clowder-framework/clowder2/pull/639
improve the logic of handling incomplete visualization configuration by @longshuicy in https://github.com/clowder-framework/clowder2/pull/637
change ESMetadata field names by @max-zilla in https://github.com/clowder-framework/clowder2/pull/626
Edit Group Name no longer erases group description by @tcnichol in https://github.com/clowder-framework/clowder2/pull/646
breadcrumb back for dataset and folder and subfolder by @tcnichol in https://github.com/clowder-framework/clowder2/pull/634
440 add extractors to the helm chart by @longshuicy in https://github.com/clowder-framework/clowder2/pull/621
Fix to dataset extractor by @ddey2 in https://github.com/clowder-framework/clowder2/pull/640
adding file size threshold limit on client side by @ddey2 in https://github.com/clowder-framework/clowder2/pull/666
add increment flag to download endpoint by @max-zilla in https://github.com/clowder-framework/clowder2/pull/658
Rewrite upload file by @longshuicy in https://github.com/clowder-framework/clowder2/pull/657
Wording Change Visualization Details by @tcnichol in https://github.com/clowder-framework/clowder2/pull/670
submit_file_job takes 5 parameters, put we had 6. by @lmarini in https://github.com/clowder-framework/clowder2/pull/672
Backend now pickups JWT token in cookie left by frontend and by @lmarini in https://github.com/clowder-framework/clowder2/pull/652
deleting file that is uploaded by @tcnichol in https://github.com/clowder-framework/clowder2/pull/675
644 Sharing minio presigned URL by @longshuicy in https://github.com/clowder-framework/clowder2/pull/655
530 improve extracted metadata component by @longshuicy in https://github.com/clowder-framework/clowder2/pull/641
Add thumbnail endpoints by @max-zilla in https://github.com/clowder-framework/clowder2/pull/678
change file version by @tcnichol in https://github.com/clowder-framework/clowder2/pull/633
fix thumbnail display, update search result icons by @max-zilla in https://github.com/clowder-framework/clowder2/pull/682
200 fix hardcoding pieces in helm chart by @longshuicy in https://github.com/clowder-framework/clowder2/pull/669
651 do not use extractor info by @tcnichol in https://github.com/clowder-framework/clowder2/pull/653
drop test database and test users before running tests by @tcnichol in https://github.com/clowder-framework/clowder2/pull/688
660 authentication timeout on search page by @longshuicy in https://github.com/clowder-framework/clowder2/pull/684
685 retire the function that generate frontend url for visualization by @longshuicy in https://github.com/clowder-framework/clowder2/pull/692
Docker compose cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/690
697 folder doesnt not aligned with the rest of the files by @longshuicy in https://github.com/clowder-framework/clowder2/pull/700
623 geoserver and geotiff previewer helm chart by @longshuicy in https://github.com/clowder-framework/clowder2/pull/686
Playing around with theme colors. These colors should make it easy by @lmarini in https://github.com/clowder-framework/clowder2/pull/677
671 file breadcrumbs in the wrong spot by @tcnichol in https://github.com/clowder-framework/clowder2/pull/674
Update populate fake data by @lmarini in https://github.com/clowder-framework/clowder2/pull/681
679 download button text disappears at small widths by @tcnichol in https://github.com/clowder-framework/clowder2/pull/717
Datasets list cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/693
File page cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/709
show new file version on file update by @max-zilla in https://github.com/clowder-framework/clowder2/pull/722
Fix bugs related to group by @longshuicy in https://github.com/clowder-framework/clowder2/pull/726
UI cleanup and bugfixes by @max-zilla in https://github.com/clowder-framework/clowder2/pull/731
727 change keycloak login theme to blue by @longshuicy in https://github.com/clowder-framework/clowder2/pull/730
735 sharing tab bugs by @tcnichol in https://github.com/clowder-framework/clowder2/pull/736
712 redesign the order of file upload form by @longshuicy in https://github.com/clowder-framework/clowder2/pull/729
Adding a card for no content by @ddey2 in https://github.com/clowder-framework/clowder2/pull/724
fixing the problem where extractors always trigger by @tcnichol in https://github.com/clowder-framework/clowder2/pull/725
733 vega visualization by @longshuicy in https://github.com/clowder-framework/clowder2/pull/737
logo without words by @longshuicy in https://github.com/clowder-framework/clowder2/pull/740
Fixing download for dataset by @ddey2 in https://github.com/clowder-framework/clowder2/pull/741
702 thumbnail bytes sometimes doesnt show with 404 by @longshuicy in https://github.com/clowder-framework/clowder2/pull/739
include clowder theme tgz by @longshuicy in https://github.com/clowder-framework/clowder2/pull/742
Use less confusing error message on missing updated time by @max-zilla in https://github.com/clowder-framework/clowder2/pull/752
746 on selecting date time picker widget type doesnt narrow down the field options by @longshuicy in https://github.com/clowder-framework/clowder2/pull/751
Enabling @context in metadata and metadata definition by @ddey2 in https://github.com/clowder-framework/clowder2/pull/750
Simple script to POST metadata definitions. by @lmarini in https://github.com/clowder-framework/clowder2/pull/762
Include parameters with extractor by @longshuicy in https://github.com/clowder-framework/clowder2/pull/770
683 include thumbnail ids in elasticsearch index by @tcnichol in https://github.com/clowder-framework/clowder2/pull/756
744 reinvestigate iframe by @longshuicy in https://github.com/clowder-framework/clowder2/pull/745
734 view and modify list of metadata definitions in UI by @longshuicy in https://github.com/clowder-framework/clowder2/pull/758
stretched icon when extractor description long by @tcnichol in https://github.com/clowder-framework/clowder2/pull/789
792 clear previous log before switching extraction logs by @longshuicy in https://github.com/clowder-framework/clowder2/pull/793
Pagination for files & folder page under dataset by @ddey2 in https://github.com/clowder-framework/clowder2/pull/797
Implement wordcloud visualization by @ddey2 in https://github.com/clowder-framework/clowder2/pull/786
message if no datasets exist, button link to create by @tcnichol in https://github.com/clowder-framework/clowder2/pull/767
Updated the labels for Share by @ddey2 in https://github.com/clowder-framework/clowder2/pull/798
778 page to display each metadata definition by @longshuicy in https://github.com/clowder-framework/clowder2/pull/801
788 duplicated extractor registration when extractor version updated by @tcnichol in https://github.com/clowder-framework/clowder2/pull/791
701 improve file version selection by @tcnichol in https://github.com/clowder-framework/clowder2/pull/743
add swagger to traefik by @longshuicy in https://github.com/clowder-framework/clowder2/pull/805

New Contributors

@sandeep-ps made their first contribution in https://github.com/clowder-framework/clowder2/pull/553

Full Changelog: https://github.com/clowder-framework/clowder2/compare/v2.0.0-alpha.2...v2.0.0-beta.1

- TypeScript
Published by lmarini over 2 years ago

https://github.com/clowder-framework/clowder2 - v2.0.0-alpha.2 | 2022-11-28

Notable Changes

Use Keycloak for user management, JWT tokens and federated identity.
Initial implementation of file versioning and nested folders within datasets.
Initial implementation of metadata entries and metadata definitions.
Initial implementation of search using Elasticsearch.
Improvements to overall UI and UX. Standardized components and widgets used.
Helm charts for Kubernetes deployment.

All Changes

Frontend refreshing mechanism by @longshuicy in https://github.com/clowder-framework/clowder2/pull/2
Registration with keycloak #3 by @longshuicy in https://github.com/clowder-framework/clowder2/pull/4
Metadata updates by @max-zilla in https://github.com/clowder-framework/clowder2/pull/6
Root directory cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/14
replace delete with delete_many by @tcnichol in https://github.com/clowder-framework/clowder2/pull/17
Download dataset by @tcnichol in https://github.com/clowder-framework/clowder2/pull/9
delete metadata when file/dataset deleted by @max-zilla in https://github.com/clowder-framework/clowder2/pull/15
Set keycloak login theme by @longshuicy in https://github.com/clowder-framework/clowder2/pull/5
modify keycloak social providers style by @longshuicy in https://github.com/clowder-framework/clowder2/pull/28
update file version number by @longshuicy in https://github.com/clowder-framework/clowder2/pull/25
22 folderdataset name not showing up in breadcrum after immediately creating file by @longshuicy in https://github.com/clowder-framework/clowder2/pull/29
Metadata creation & deletion tests by @max-zilla in https://github.com/clowder-framework/clowder2/pull/31
Match delete metadata in the frontend #19 by @longshuicy in https://github.com/clowder-framework/clowder2/pull/20
Simple rabbitmq setup. by @lmarini in https://github.com/clowder-framework/clowder2/pull/37
Remove unused widgets by @lmarini in https://github.com/clowder-framework/clowder2/pull/36
fix delete error by @longshuicy in https://github.com/clowder-framework/clowder2/pull/40
47 keycloak needs volume to store user data by @tcnichol in https://github.com/clowder-framework/clowder2/pull/48
24 store file type size in mongodb by @tcnichol in https://github.com/clowder-framework/clowder2/pull/27
30 add new metadata on existing dataset and file by @longshuicy in https://github.com/clowder-framework/clowder2/pull/45
12 create dataset from zip by @tcnichol in https://github.com/clowder-framework/clowder2/pull/16
Build frontend for both linux/amd64 and linux/arm64 by @lmarini in https://github.com/clowder-framework/clowder2/pull/44
fix patch endpoint of dataset by @longshuicy in https://github.com/clowder-framework/clowder2/pull/70
41 random jwt signature verification failed error by @longshuicy in https://github.com/clowder-framework/clowder2/pull/46
Upgraded node to 16.15.1 LTS. Had to modify several dependencies and … by @lmarini in https://github.com/clowder-framework/clowder2/pull/33
setting default limits to 10 for get datasets and get dataset files by @tcnichol in https://github.com/clowder-framework/clowder2/pull/72
ro crate and bagit by @tcnichol in https://github.com/clowder-framework/clowder2/pull/56
url to link to the correct repo by @longshuicy in https://github.com/clowder-framework/clowder2/pull/78
fix content type by @longshuicy in https://github.com/clowder-framework/clowder2/pull/83
ensure m1 / arm64 image is pushed to Dockerhub by @KastanDay in https://github.com/clowder-framework/clowder2/pull/91
82 delete files does not always work by @longshuicy in https://github.com/clowder-framework/clowder2/pull/85
93 add favicon by @longshuicy in https://github.com/clowder-framework/clowder2/pull/94
54 add widget type field and break the current widget into smaller components by @longshuicy in https://github.com/clowder-framework/clowder2/pull/60
Elasticsearch for v2 by @ddey2 in https://github.com/clowder-framework/clowder2/pull/73
Metadata4more resource types by @MBcode in https://github.com/clowder-framework/clowder2/pull/80
57 file does not upload to folder by @longshuicy in https://github.com/clowder-framework/clowder2/pull/81
Fix/pytest keycloak timeout by @lmarini in https://github.com/clowder-framework/clowder2/pull/98
Fixed file upload. Provide default folder_id = None. by @lmarini in https://github.com/clowder-framework/clowder2/pull/103
Register extractor submit file by @tcnichol in https://github.com/clowder-framework/clowder2/pull/66
84 frontend implement delete folders by @longshuicy in https://github.com/clowder-framework/clowder2/pull/92
Directories cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/106
Fix/populate fake data by @lmarini in https://github.com/clowder-framework/clowder2/pull/107
Explore page cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/108
Added indexing for dataset and added documentation #89 by @ddey2 in https://github.com/clowder-framework/clowder2/pull/109
Drawer menu by @lmarini in https://github.com/clowder-framework/clowder2/pull/129
Added endpoint to search both file and dataset. by @ddey2 in https://github.com/clowder-framework/clowder2/pull/139
Updated elasticsearch indices on updating files and datasets by @ddey2 in https://github.com/clowder-framework/clowder2/pull/140
Fix/GitHub action pipenv by @lmarini in https://github.com/clowder-framework/clowder2/pull/159
155 elasticsearch dependency injection instead of creating a client everytime by @ddey2 in https://github.com/clowder-framework/clowder2/pull/157
WIP: 95 conclude metadata design documentation by @longshuicy in https://github.com/clowder-framework/clowder2/pull/99
166 fix npm dependency issue by @longshuicy in https://github.com/clowder-framework/clowder2/pull/167
Scripts to help with development. by @lmarini in https://github.com/clowder-framework/clowder2/pull/161
131 custom widget and appearance for reactivesearch by @longshuicy in https://github.com/clowder-framework/clowder2/pull/134
Extractors -> listeners, trigger listeners on saved feeds automatically by @max-zilla in https://github.com/clowder-framework/clowder2/pull/114
127 add parameters to extractor submit add submit dataset by @tcnichol in https://github.com/clowder-framework/clowder2/pull/128
132 reactive search routes when token expire logout by @longshuicy in https://github.com/clowder-framework/clowder2/pull/164
Implemented Metadata Definition UI by @arunapa in https://github.com/clowder-framework/clowder2/pull/150
include metadata JSON file in output zip by @max-zilla in https://github.com/clowder-framework/clowder2/pull/178
Generic error catching in DB by @max-zilla in https://github.com/clowder-framework/clowder2/pull/152
fix keycloak version to use 19.0 since it's the most compatibale majo… by @longshuicy in https://github.com/clowder-framework/clowder2/pull/186
Track pycharm run configuration in git repository. by @lmarini in https://github.com/clowder-framework/clowder2/pull/179
122 minify keycloak realm json so kubernetes clusters have easier way to load it by @longshuicy in https://github.com/clowder-framework/clowder2/pull/123
175 search box syntax by @longshuicy in https://github.com/clowder-framework/clowder2/pull/181
fix frontend build by @longshuicy in https://github.com/clowder-framework/clowder2/pull/187
make first name and last name required by @longshuicy in https://github.com/clowder-framework/clowder2/pull/190
Fixed missing button by @arunapa in https://github.com/clowder-framework/clowder2/pull/196
fix bug when upload file by @longshuicy in https://github.com/clowder-framework/clowder2/pull/193
142 remove url encoding when creating dataset and files by @longshuicy in https://github.com/clowder-framework/clowder2/pull/189
Dataset page cleanup by @lmarini in https://github.com/clowder-framework/clowder2/pull/194
helmchart to deploy clowder2 in kubernetes by @robkooper in https://github.com/clowder-framework/clowder2/pull/119
23 dashboard and breadcrumb need unique key prop by @longshuicy in https://github.com/clowder-framework/clowder2/pull/202
Fixing trailing whitespace issue, renamed list checkbox by @arunapa in https://github.com/clowder-framework/clowder2/pull/215
206 modify time facet not working properly by @longshuicy in https://github.com/clowder-framework/clowder2/pull/213
Initial implementation of metadata indexing by @ddey2 in https://github.com/clowder-framework/clowder2/pull/173
Fixed list creation issues by @arunapa in https://github.com/clowder-framework/clowder2/pull/220
UI tweaks by @lmarini in https://github.com/clowder-framework/clowder2/pull/216
Delete bad JWT token after attempting a refresh to avoid 403 on OPTIO… by @lmarini in https://github.com/clowder-framework/clowder2/pull/219
Fixed page reload issue and date time picker render by @arunapa in https://github.com/clowder-framework/clowder2/pull/218
202 file breadcrumb folders not in breadcrumb for files fixed by @tcnichol in https://github.com/clowder-framework/clowder2/pull/214
Release/alpha 2 by @lmarini in https://github.com/clowder-framework/clowder2/pull/223

New Contributors

@max-zilla made their first contribution in https://github.com/clowder-framework/clowder2/pull/6
@lmarini made their first contribution in https://github.com/clowder-framework/clowder2/pull/14
@tcnichol made their first contribution in https://github.com/clowder-framework/clowder2/pull/17
@KastanDay made their first contribution in https://github.com/clowder-framework/clowder2/pull/91
@ddey2 made their first contribution in https://github.com/clowder-framework/clowder2/pull/73
@MBcode made their first contribution in https://github.com/clowder-framework/clowder2/pull/80
@arunapa made their first contribution in https://github.com/clowder-framework/clowder2/pull/150
@robkooper made their first contribution in https://github.com/clowder-framework/clowder2/pull/119

Full Changelog: https://github.com/clowder-framework/clowder2/commits/v2.0.0-alpha.2

- TypeScript
Published by lmarini over 3 years ago

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Open Source Science

Recent Releases of https://github.com/clowder-framework/clowder2

https://github.com/clowder-framework/clowder2 - v2.0.0-beta.3

Overview

In Depth Changes

New Contributors

https://github.com/clowder-framework/clowder2 - v2.0.0-beta.2

What's Changed

New Contributors

https://github.com/clowder-framework/clowder2 - v2.0.0-beta.1

What's Changed

New Contributors

https://github.com/clowder-framework/clowder2 - v2.0.0-alpha.2 | 2022-11-28

Notable Changes

All Changes

New Contributors