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Open Source Science

https://github.com/cnpem/pymol4macos

Open Source PyMOL for macOS

https://github.com/cnpem/pymol4macos

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (9.7%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Open Source PyMOL for macOS

Basic Info
  • Host: GitHub
  • Owner: cnpem
  • Default Branch: main
  • Size: 29.3 KB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created over 3 years ago · Last pushed about 2 years ago
Metadata Files
Readme

README.md

Open Source PyMOL for macOS

Open source PyMOL is available free of charge and may be installed via the Homebrew package manager.

This repository provides a method to install PyMOL v2.6 on macOS. If necessary, a portuguese version of this guide is available here.

Download & Installation

Follow these steps to install PyMOL v2.6:

  1. Install Homebrew:

bash /bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"

  1. Install PyMOL dependencies (python, xquartz, tcl-tk, Qt5) using Homebrew:

bash brew install Caskroom/cask/xquartz brew install tcl-tk brew install python pip install pyqt5

  1. Install PyMOL

bash brew install brewsci/bio/pymol

  1. Create an application executable for PyMOL:
  • Open Automator, which is in Applications in macOS.
  • Create new document, select “Application”.
  • Select “Actions” and “Library” in the left pane. Select “Utilities” and “Run Shell Script”. Drag this into the main pane.
  • Choose “/bin/bash” as a shell.
  • Paste the following: /usr/local/bin/pymol -M. If this doesn’t work, check the path to PyMOL using which pymol in the terminal, and use this instead.
  • Save the application (“File > Save”) to the Desktop and name it “PyMOL”.
  1. Launch PyMOL v2.6

In the terminal, run:

bash pymol

or, you can start PyMOL by double clicking the created application in the desktop.

Owner

  • Name: Brazilian Center for Research in Energy and Materials (CNPEM)
  • Login: cnpem
  • Kind: organization
  • Location: Brazil

GitHub Events

Total
  • Watch event: 1
Last Year
  • Watch event: 1

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 10
  • Total Committers: 1
  • Avg Commits per committer: 10.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
jvsguerra j****a@g****m 10

Issues and Pull Requests

Last synced: about 1 year ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Dependencies

.github/workflows/testing.yml actions
  • actions/checkout v3 composite
  • actions/setup-python v4 composite