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https://github.com/colomoto/colomoto-docker-py

Helper script for launching the CoLoMoTo Docker distribution

https://github.com/colomoto/colomoto-docker-py

Science Score: 26.0%

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    CITATION.cff file
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    Found codemeta.json file
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    Found .zenodo.json file
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    Scientific vocabulary similarity
    Low similarity (9.4%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Helper script for launching the CoLoMoTo Docker distribution

Basic Info
Statistics
  • Stars: 0
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 3
Created about 2 years ago · Last pushed 10 months ago
Metadata Files
Readme

README.md

Helper Python script for launching the CoLoMoTo Docker distribution.

Installation

You need Docker and Python. We support GNU/Linux, macOS, and Windows.

In a terminal:

pip install -U colomoto-docker

In case of trouble, try python3 -m pip install -U colomoto-docker

Usage

colomoto-docker

After preparing the Docker container, the command should open your webbrowser to the Jupyter Lab interface.

The container can be stopped by pressing Ctrl+C keys.

By default, the script will fetch the most recent colomoto/colomoto-docker tag. A specific tag can be specified using the -V option; or use -V same to use the most recently fetched image. For example:

colomoto-docker                 # uses the most recently fetched image
colomoto-docker -V latest       # fetches the latest published image
colomoto-docker -V 2024-04-01   # fetches a specific image

Warning: by default, the files within the Docker container are isolated from the running host computer, therefore files are deleted after stopping the container, except the files within the persistent directory.

To have access to the files of your current directory you can use the --bind option:

colomoto-docker --bind .

If you want to have the tutorial notebooks alongside your local files, you can do the following:

mkdir notebooks
colomoto-docker -v notebooks:local-notebooks

in the Jupyter browser, you will see a local-notebooks directory which is bound to your notebooks directory.

Selecting interface

colomoto-docker --lab          # laucnh Jupyter Lab interface (default)
colomoto-docker --notebook     # launch Jupyter Notebook interface
colomoto-docker --shell        # launch shell
colomoto-docker command line   # execute command line in place of launching the interface

Running old images

On some systems, older images may require changing default security options.

colomoto-docker --ulimit nofile=8096 -V 2018-05-29

Other options

See

colomoto-docker --help

for other options.

Owner

  • Name: Consortium for Logical Models and Tools
  • Login: colomoto
  • Kind: organization

GitHub Events

Total
  • Release event: 2
  • Push event: 3
  • Pull request event: 4
  • Fork event: 1
  • Create event: 1
Last Year
  • Release event: 2
  • Push event: 3
  • Pull request event: 4
  • Fork event: 1
  • Create event: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 0
  • Total pull requests: 4
  • Average time to close issues: N/A
  • Average time to close pull requests: 22 days
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.25
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 4
  • Average time to close issues: N/A
  • Average time to close pull requests: 22 days
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.25
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • pictavien (4)
Top Labels
Issue Labels
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Packages

  • Total packages: 1
  • Total downloads:
    • pypi 206 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 40
  • Total maintainers: 1
pypi.org: colomoto-docker

Helper script to run docker image colomoto/colomoto-docker

  • Versions: 40
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 206 Last month
Rankings
Dependent packages count: 10.1%
Forks count: 12.6%
Stargazers count: 13.9%
Average: 15.4%
Downloads: 18.8%
Dependent repos count: 21.6%
Maintainers (1)
pauleve
Last synced: 10 months ago

Dependencies

.github/workflows/release.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v1 composite
setup.py pypi