https://github.com/compevol/beast3
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
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✓.zenodo.json file
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○DOI references
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○Scientific vocabulary similarity
Low similarity (13.5%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: CompEvol
- License: lgpl-2.1
- Language: Java
- Default Branch: master
- Size: 9.46 MB
Statistics
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 3
- Releases: 0
Metadata Files
README.md
BEAST 2
BEAST is a cross-platform program for Bayesian inference using MCMC of molecular sequences. It is entirely oriented towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability. We include a simple to use user-interface program for setting up standard analyses and a suit of programs for analysing the results.
NOTE: This directory contains the BEAST 2 source code, and is therefore of interest primarily to BEAST 2 developers. For binary releases, user tutorials and other information you should visit the project website at beast2.org.
Development Rules and Philosophy
Aspects relating to BEAST 2 development such as coding style, version numbering and design philosophy are discussed on the BEAST 2 web page at beast2.org/package-development-guide/core-development-rules.
License
BEAST 2 is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version. A copy of the license is contained in the file COPYING, located in the root directory of this repository.
This software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License contained in the file COPYING for more details.
Owner
- Name: Computational Evolution Group
- Login: CompEvol
- Kind: organization
- Location: University of Auckland, Auckland, New Zealand
- Website: http://compevol.auckland.ac.nz/
- Repositories: 20
- Profile: https://github.com/CompEvol
GitHub Events
Total
- Issues event: 1
- Watch event: 1
- Push event: 11
- Public event: 1
- Pull request event: 2
- Create event: 1
Last Year
- Issues event: 1
- Watch event: 1
- Push event: 11
- Public event: 1
- Pull request event: 2
- Create event: 1
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 1
- Total pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: less than a minute
- Total issue authors: 1
- Total pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: less than a minute
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- walterxie (1)
Pull Request Authors
- walterxie (1)
Top Labels
Issue Labels
Pull Request Labels
Dependencies
- openjdk 11 build