Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/computecanada/containers-recipes

https://github.com/computecanada/containers-recipes

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.7%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: ComputeCanada
  • Language: Shell
  • Default Branch: main
  • Size: 87.9 KB
Statistics
  • Stars: 1
  • Watchers: 9
  • Forks: 3
  • Open Issues: 0
  • Releases: 0
Created over 3 years ago · Last pushed over 1 year ago
Metadata Files
Readme

README.md

containers-recipes

ncov-tools

Ncov-tools is a set of tools and plots for perfoming quality control on coronavirus sequencing results. Developed by Jared Simpson and Richard de Borja. The container recipe (Dockerfile) has all the environment requirements to run ncov-tools and was created by Pierre-Olivier Quirion.

More information can be found in the original repository here.

GenPipes

GenPipes is a workflow management system that includes a set of standard pipelines for bioinformatics analyses. It is developed and maintained by the Canadian Centre for Computational Genomics (C3G). The container recipe (Dockerfile) has all the environment requirements to run GenPipes pipelines and was created by Pierre-Olivier Quirion.

More information can be found in the original repository here. Additional documentation about the container can be found here.

Owner

  • Name: Compute Canada / Calcul Canada
  • Login: ComputeCanada
  • Kind: organization
  • Location: Canada

GitHub Events

Total
  • Delete event: 1
  • Issue comment event: 1
  • Push event: 1
  • Pull request review event: 4
  • Pull request review comment event: 4
  • Pull request event: 3
  • Create event: 1
Last Year
  • Delete event: 1
  • Issue comment event: 1
  • Push event: 1
  • Pull request review event: 4
  • Pull request review comment event: 4
  • Pull request event: 3
  • Create event: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 0
  • Total pull requests: 2
  • Average time to close issues: N/A
  • Average time to close pull requests: about 2 hours
  • Total issue authors: 0
  • Total pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 1.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 2
  • Average time to close issues: N/A
  • Average time to close pull requests: about 2 hours
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 1.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • poquirion (1)
  • sridhar-ravi (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

recipes/genpipes/Dockerfile docker
  • centos 7.9.2009 build
recipes/ncov-tools/Dockerfile docker
  • continuumio/miniconda3 4.8.2 build