Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/cossio/pfam.jl

Julia package to interact with the Pfam database.

https://github.com/cossio/pfam.jl

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (1.5%) to scientific vocabulary

Keywords

julia pfam

Keywords from Contributors

labels
Last synced: 11 months ago · JSON representation

Repository

Julia package to interact with the Pfam database.

Basic Info
  • Host: GitHub
  • Owner: cossio
  • License: mit
  • Language: Julia
  • Default Branch: master
  • Homepage:
  • Size: 256 KB
Statistics
  • Stars: 2
  • Watchers: 2
  • Forks: 0
  • Open Issues: 1
  • Releases: 11
Topics
julia pfam
Created over 6 years ago · Last pushed 12 months ago
Metadata Files
Readme Changelog License

README.md

Pfam Julia package

Julia package to download files from Pfam.

julia import Pfam file_path = Pfam.pdbmap() # returns path to pdbmap file containing mapping between PFAM families and PDB structures

Owner

  • Name: Jorge Fernandez-de-Cossio-Diaz
  • Login: cossio
  • Kind: user

GitHub Events

Total
  • Delete event: 2
  • Issue comment event: 2
  • Pull request event: 1
  • Create event: 2
  • Commit comment event: 2
Last Year
  • Delete event: 2
  • Issue comment event: 2
  • Pull request event: 1
  • Create event: 2
  • Commit comment event: 2

Committers

Last synced: 11 months ago

All Time
  • Total Commits: 89
  • Total Committers: 4
  • Avg Commits per committer: 22.25
  • Development Distribution Score (DDS): 0.618
Past Year
  • Commits: 11
  • Committers: 2
  • Avg Commits per committer: 5.5
  • Development Distribution Score (DDS): 0.091
Top Committers
Name Email Commits
cossio c****o@u****m 34
cossio j****z@g****m 33
dependabot[bot] 4****]@u****m 13
Jorge FdCD j****d@i****m 9

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 2
  • Total pull requests: 50
  • Average time to close issues: 17 days
  • Average time to close pull requests: 16 days
  • Total issue authors: 2
  • Total pull request authors: 2
  • Average comments per issue: 5.5
  • Average comments per pull request: 0.62
  • Merged pull requests: 12
  • Bot issues: 0
  • Bot pull requests: 49
Past Year
  • Issues: 0
  • Pull requests: 3
  • Average time to close issues: N/A
  • Average time to close pull requests: less than a minute
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 3
View more stats
Top Authors
Issue Authors
  • JuliaTagBot (1)
  • timholy (1)
Pull Request Authors
  • dependabot[bot] (49)
  • cossio (1)
Top Labels
Issue Labels
Pull Request Labels
dependencies (49) github_actions (3)

Dependencies

.github/workflows/ci.yml actions
  • actions/checkout b4ffde65f46336ab88eb53be808477a3936bae11 composite
  • julia-actions/cache dc1a3cdeacb521b0ca93cfc66143fcadb15a5bd0 composite
  • julia-actions/julia-buildpkg 90dd6f23eb49626e4e6612cb9d64d456f86e6a1c composite
  • julia-actions/julia-runtest 79a7e100883947123f8263c5f06e6c0ea3eb972f composite
  • julia-actions/setup-julia ac0d62164df5a47de404f4e96ce86a1a28a28d56 composite