https://github.com/cossio/logomaker.jl

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
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codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
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DOI references
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Academic publication links
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Academic email domains
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (3.7%) to scientific vocabulary

Last synced: 10 months ago · JSON representation

Repository

Basic Info

Host: GitHub
Owner: cossio
License: mit
Language: Julia
Default Branch: master
Size: 1.06 MB

Statistics

Stars: 0
Watchers: 2
Forks: 0
Open Issues: 1
Releases: 5

Created over 3 years ago · Last pushed 10 months ago

Metadata Files

Readme Changelog License

README.md

Logomaker Julia package

A Julia wrapper of the Logomaker Python package to plot sequence logos.

```julia import Logomaker, PythonCall

color_scheme = PythonCall.pydict(Dict('A' => "blue", 'C' => "gold", 'G' => "green", 'U' => "red", '-' => "gray"))

weights is a matrix containing scores, e.g. conservation.

logo = Logomaker.Logo(weights, collect("ACGU-"); colorscheme) logo.ax.setylim(0, log2(5)) logo.fig ```

Example sequence logo

See the docs for a full example.

Owner

Name: Jorge Fernandez-de-Cossio-Diaz
Login: cossio
Kind: user

Repositories: 24
Profile: https://github.com/cossio

GitHub Events

Total

Create event: 2
Commit comment event: 3
Release event: 1
Delete event: 1
Pull request event: 1

Last Year

Create event: 2
Commit comment event: 3
Release event: 1
Delete event: 1
Pull request event: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time

Total issues: 1
Total pull requests: 2
Average time to close issues: less than a minute
Average time to close pull requests: about 1 hour
Total issue authors: 1
Total pull request authors: 1
Average comments per issue: 4.0
Average comments per pull request: 0.0
Merged pull requests: 1
Bot issues: 0
Bot pull requests: 2

Past Year

Issues: 0
Pull requests: 2
Average time to close issues: N/A
Average time to close pull requests: about 1 hour
Issue authors: 0
Pull request authors: 1
Average comments per issue: 0
Average comments per pull request: 0.0
Merged pull requests: 1
Bot issues: 0
Bot pull requests: 2

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Top Authors

Issue Authors

JuliaTagBot (1)

Pull Request Authors

dependabot[bot] (2)

Top Labels

Issue Labels

Pull Request Labels

dependencies (2)

Packages

Total packages: 1
Total downloads:
- julia 1 total

Total dependent packages: 0
Total dependent repositories: 0
Total versions: 6

juliahub.com: Logomaker

Documentation: https://docs.juliahub.com/General/Logomaker/stable/
License: MIT
Latest release: 2.0.3
published about 1 year ago

Versions: 6
Dependent Packages: 0
Dependent Repositories: 0
Downloads: 1 Total

Rankings

Dependent repos count: 9.9%

Dependent packages count: 38.9%

Average: 43.9%

Forks count: 53.5%

Stargazers count: 73.2%