gaussplotR - gaussplotR: Fit, Predict and Plot 2D-Gaussians in R

• Accepted by the Journal of Open Source Software

Scientific Software - Peer-reviewed - HTML
Published by vbaliga over 4 years ago

gaussplotR - Post-peer review at the Journal of Open Source Software

• print() and summary() on objects that are output from fit_gaussian_2D() now round parameter estimates to two decimal places
• R version requirement downgraded to R >= 3.3.0

Scientific Software - Peer-reviewed - HTML
Published by vbaliga over 4 years ago

gaussplotR - Update CRAN version to 0.2.3

Add autofit_gaussian_2D(), compare_gaussian_fits(), and characterize_gaussian_fits() to the CRAN version of the package. Minor updates elsewhere

Scientific Software - Peer-reviewed - HTML
Published by vbaliga almost 5 years ago

gaussplotR - add autofit, compare, and characterize functions

Newest functions enhance the automation of comparing among various Gaussian fit models. The autofit_gaussian_2D() function can be used to find the best-fitting model for a given data set. The compare_gaussian_fits() function compares models via criteria such as rmse or rss. A characterize_gaussian_fits() analyzes the orientation and partial correlations of Gaussian data. Features include computation of partial correlations between response variables and independent and diagonally-tuned predictions, along with Z-difference scoring.

Scientific Software - Peer-reviewed - HTML
Published by vbaliga almost 5 years ago

gaussplotR - Update CRAN to version 0.2.0

New features include fitgaussian2D(), which fits a 2D Gaussian to supplied data, along with updates to predictgaussian2D()

Scientific Software - Peer-reviewed - HTML
Published by vbaliga about 5 years ago

gaussplotR - Add fit function

A function to fit 2D Gaussians to supplied data is now available; see gaussplotR::fit_gaussian_2D()

Scientific Software - Peer-reviewed - HTML
Published by vbaliga about 5 years ago

gaussplotR - Add volume calculation

Added a compute_gaussian_volume() function to compute the volume under a given 2D gaussian

Scientific Software - Peer-reviewed - HTML
Published by vbaliga about 5 years ago

gaussplotR - ready for CRAN submission

this release should take care of all the remaining issues re: CRAN submission

Scientific Software - Peer-reviewed - HTML
Published by vbaliga about 5 years ago

gaussplotR - prep for CRAN submission

content of the package's functions has not changed; all recent updates were made to satisfy requirements for submitting to CRAN

Scientific Software - Peer-reviewed - HTML
Published by vbaliga about 5 years ago

gaussplotR - ready for general use

The function predict_gaussian_2D() no longer requires a log2 transformation internally, which makes the function (and the package) more generically useful

Scientific Software - Peer-reviewed - HTML
Published by vbaliga over 5 years ago

gaussplotR - try blank release

trying to trigger zenodo

Scientific Software - Peer-reviewed - HTML
Published by vbaliga over 5 years ago

gaussplotR - nearly there

gearing up for production

Scientific Software - Peer-reviewed - HTML
Published by vbaliga over 5 years ago

gaussplotR - First release

This package currently offers the ability to predict values from a 2D Gaussian function and then use those predicted values to produce contour plots. At this time, parameters of the Gaussian will need to be known in advance (fitting procedures are targeted for a later release)

Scientific Software - Peer-reviewed - HTML
Published by vbaliga over 5 years ago