seaborn
seaborn: statistical data visualization - Published in JOSS (2021)
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Published in Journal of Open Source Software
Keywords
Keywords from Contributors
Repository
Statistical data visualization in Python
Basic Info
- Host: GitHub
- Owner: mwaskom
- License: bsd-3-clause
- Language: Python
- Default Branch: master
- Homepage: https://seaborn.pydata.org
- Size: 51.4 MB
Statistics
- Stars: 13,406
- Watchers: 255
- Forks: 2,028
- Open Issues: 187
- Releases: 37
Topics
Metadata Files
README.md
seaborn: statistical data visualization
Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing attractive statistical graphics.
Documentation
Online documentation is available at seaborn.pydata.org.
The docs include a tutorial, example gallery, API reference, FAQ, and other useful information.
To build the documentation locally, please refer to doc/README.md.
Dependencies
Seaborn supports Python 3.8+.
Installation requires numpy, pandas, and matplotlib. Some advanced statistical functionality requires scipy and/or statsmodels.
Installation
The latest stable release (and required dependencies) can be installed from PyPI:
pip install seaborn
It is also possible to include optional statistical dependencies:
pip install seaborn[stats]
Seaborn can also be installed with conda:
conda install seaborn
Note that the main anaconda repository lags PyPI in adding new releases, but conda-forge (-c conda-forge) typically updates quickly.
Citing
A paper describing seaborn has been published in the Journal of Open Source Software. The paper provides an introduction to the key features of the library, and it can be used as a citation if seaborn proves integral to a scientific publication.
Testing
Testing seaborn requires installing additional dependencies; they can be installed with the dev extra (e.g., pip install .[dev]).
To test the code, run make test in the source directory. This will exercise the unit tests (using pytest) and generate a coverage report.
Code style is enforced with flake8 using the settings in the setup.cfg file. Run make lint to check. Alternately, you can use pre-commit to automatically run lint checks on any files you are committing: just run pre-commit install to set it up, and then commit as usual going forward.
Development
Seaborn development takes place on Github: https://github.com/mwaskom/seaborn
Please submit bugs that you encounter to the issue tracker with a reproducible example demonstrating the problem. Questions about usage are more at home on StackOverflow, where there is a seaborn tag.
Owner
- Name: Michael Waskom
- Login: mwaskom
- Kind: user
- Location: New York, NY
- Company: @modal-labs
- Website: mwaskom.github.io
- Repositories: 58
- Profile: https://github.com/mwaskom
JOSS Publication
seaborn: statistical data visualization
Authors
Center for Neural Science, New York University
Tags
data science data visualization statistical graphicsCitation (CITATION.cff)
cff-version: 1.2.0
message: "If seaborn is integral to a scientific publication, please cite the following paper:"
preferred-citation:
type: article
authors:
- family-names: "Waskom"
given-names: "Michael Lawrence"
orcid: "https://orcid.org/0000-0002-9817-6869"
doi: "10.21105/joss.03021"
journal: "Journal of Open Source Software"
month: April
title: "seaborn: statistical data visualization"
issue: 6
volume: 60
year: 2021
url: "https://joss.theoj.org/papers/10.21105/joss.03021"
Papers & Mentions
Total mentions: 283
CENP-A overexpression promotes distinct fates in human cells, depending on p53 status
- DOI: 10.1038/s42003-021-01941-5
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Paralog dependency indirectly affects the robustness of human cells
- DOI: 10.15252/msb.20198871
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Cell shape, and not 2D migration, predicts extracellular matrix-driven 3D cell invasion in breast cancer
- DOI: 10.1063/1.5143779
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Need for speed: evaluation of dilute and shoot-mass spectrometry for accelerated metabolic phenotyping in bioprocess development
- DOI: 10.1007/s00216-021-03261-3
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Combined Metabolic and Chemical (CoMetChem) Labeling Using Stable Isotopes—a Strategy to Reveal Site-Specific Histone Acetylation and Deacetylation Rates by LC–MS
- DOI: 10.1021/acs.analchem.1c01359
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Comparison of the Surface Thermal Patterns of Horses and Donkeys in Infrared Thermography Images
- DOI: 10.3390/ani10122201
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Vitamin C Supplementation in Healthy Individuals Leads to Shifts of Bacterial Populations in the Gut—A Pilot Study
- DOI: 10.3390/antiox10081278
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MSIFinder: a python package for detecting MSI status using random forest classifier
- DOI: 10.1186/s12859-021-03986-z
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C-State: an interactive web app for simultaneous multi-gene visualization and comparative epigenetic pattern search
- DOI: 10.1186/s12859-017-1786-6
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- Published: September 2017
Identification, visualization, statistical analysis and mathematical modeling of high-feedback loops in gene regulatory networks
- DOI: 10.1186/s12859-021-04405-z
- OpenAlex ID: https://openalex.org/W3202556172
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Unboxing cluster heatmaps
- DOI: 10.1186/s12859-016-1442-6
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rstoolbox - a Python library for large-scale analysis of computational protein design data and structural bioinformatics
- DOI: 10.1186/s12859-019-2796-3
- OpenAlex ID: https://openalex.org/W2944895683
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Hypercluster: a flexible tool for parallelized unsupervised clustering optimization
- DOI: 10.1186/s12859-020-03774-1
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- Published: September 2020
A phenomics approach for antiviral drug discovery
- DOI: 10.1186/s12915-021-01086-1
- OpenAlex ID: https://openalex.org/W3192523804
- Published: August 2021
CloneSifter: enrichment of rare clones from heterogeneous cell populations
- DOI: 10.1186/s12915-020-00911-3
- OpenAlex ID: https://openalex.org/W3108673844
- Published: November 2020
Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)
- DOI: 10.1186/s12915-020-00881-6
- OpenAlex ID: https://openalex.org/W3093832237
- Published: October 2020
Fluorescent amplification for next generation sequencing (FA-NGS) library preparation
- DOI: 10.1186/s12864-020-6481-8
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- Published: January 2020
Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity
- DOI: 10.1186/s12864-020-06920-4
- OpenAlex ID: https://openalex.org/W3045045199
- Published: July 2020
Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana
- DOI: 10.1186/s12864-021-07711-1
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- Published: May 2021
Machine learning based imputation techniques for estimating phylogenetic trees from incomplete distance matrices
- DOI: 10.1186/s12864-020-06892-5
- OpenAlex ID: https://openalex.org/W3043934961
- Published: July 2020
On tower and checkerboard neural network architectures for gene expression inference
- DOI: 10.1186/s12864-020-06821-6
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The Mycobacterium tuberculosis transcriptional landscape under genotoxic stress
- DOI: 10.1186/s12864-016-3132-1
- OpenAlex ID: https://openalex.org/W2530396203
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New restraints and validation approaches for nucleic acid structures in <i>PDB-REDO</i>
- DOI: 10.1107/S2059798321007610
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Temporal relationship of computed and structured diagnoses in electronic health record data
- DOI: 10.1186/s12911-021-01416-x
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The murine vaginal microbiota and its perturbation by the human pathogen group B Streptococcus
- DOI: 10.1186/s12866-018-1341-2
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- Published: November 2018
Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis
- DOI: 10.1186/s12918-018-0534-5
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NanoPack: visualizing and processing long-read sequencing data
- DOI: 10.1093/bioinformatics/bty149
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Profiling microbial strains in urban environments using metagenomic sequencing data
- DOI: 10.1186/s13062-018-0211-z
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The Relationship between the Strength Characteristics of Cerebral Aneurysm Walls with Their Status and Laser-Induced Fluorescence Data
- DOI: 10.3390/biomedicines9050537
- OpenAlex ID: https://openalex.org/W3160059116
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Heteroplasmic Variants of Mitochondrial DNA in Atherosclerotic Lesions of Human Aortic Intima
- DOI: 10.3390/biom9090455
- OpenAlex ID: https://openalex.org/W2972099238
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Self‐administered biofeedback treatment app for pediatric migraine: A randomized pilot study
- DOI: 10.1002/brb3.1974
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Applying a Chemogeographic Strategy for Natural Product Discovery from the Marine Cyanobacterium Moorena bouillonii
- DOI: 10.3390/md18100515
- OpenAlex ID: https://openalex.org/W3092891036
- Published: October 2020
Predicting Blood–Brain Barrier Permeability of Marine-Derived Kinase Inhibitors Using Ensemble Classifiers Reveals Potential Hits for Neurodegenerative Disorders
- DOI: 10.3390/md17020081
- OpenAlex ID: https://openalex.org/W2914870491
- Published: January 2019
Kororamides, Convolutamines, and Indole Derivatives as Possible Tau and Dual-Specificity Kinase Inhibitors for Alzheimer’s Disease: A Computational Study
- DOI: 10.3390/md16100386
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Three Dimensional Methodology to Characterize Large Dendritic Equiaxed Grains in Industrial Steel Ingots
- DOI: 10.3390/ma11061007
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A Targeted Serum Metabolomics GC-MS Approach Identifies Predictive Blood Biomarkers for Retained Placenta in Holstein Dairy Cows
- DOI: 10.3390/metabo11090633
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Correlation of Metabolic Profiles of Plasma and Cerebrospinal Fluid of High-Grade Glioma Patients
- DOI: 10.3390/metabo11030133
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Correlation between bacterial G+C content, genome size and the G+C content of associated plasmids and bacteriophages
- DOI: 10.1099/mgen.0.000168
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Transmission, adaptation and geographical spread of the Pseudomonas aeruginosa Liverpool epidemic strain
- DOI: 10.1099/mgen.0.000511
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Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study
- DOI: 10.1186/s40168-016-0225-7
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Transplanted human fecal microbiota enhanced Guillain Barré syndrome autoantibody responses after Campylobacter jejuni infection in C57BL/6 mice
- DOI: 10.1186/s40168-017-0284-4
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- Published: August 2017
Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage
- DOI: 10.1186/s40168-021-01119-5
- OpenAlex ID: https://openalex.org/W3129822243
- Published: August 2021
Loss of fuss in Drosophila melanogaster results in decreased locomotor activity due to an increased number of pauses.
- DOI: 10.17912/micropub.biology.000230
- OpenAlex ID: https://openalex.org/W3011765160
- Published: March 2020
Group Contribution Estimation of Ionic Liquid Melting Points: Critical Evaluation and Refinement of Existing Models
- DOI: 10.3390/molecules26092454
- OpenAlex ID: https://openalex.org/W3155134596
- Published: April 2021
Comparative Assessment of Protein Kinase Inhibitors in Public Databases and in PKIDB
- DOI: 10.3390/molecules25143226
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A pilot study of patient satisfaction with a self-completed tablet-based digital questionnaire for collecting the patient’s medical history in an emergency department
- DOI: 10.1186/s12913-021-06748-y
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Evolution of a Landscape Phage Library in a Mouse Xenograft Model of Human Breast Cancer
- DOI: 10.3390/v11110988
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Spatio-Temporal Mutational Profile Appearances of Swedish SARS-CoV-2 during the Early Pandemic
- DOI: 10.3390/v12091026
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- Published: September 2020
Mathematical Modelling of the Molecular Mechanisms of Interaction of Tenofovir with Emtricitabine against HIV
- DOI: 10.3390/v13071354
- OpenAlex ID: https://openalex.org/W3177705413
- Published: July 2021
Prediction of mosquito species and population age structure using mid-infrared spectroscopy and supervised machine learning
- DOI: 10.12688/wellcomeopenres.15201.3
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- Published: September 2019
PyOmeroUpload: A Python toolkit for uploading images and metadata to OMERO
- DOI: 10.12688/wellcomeopenres.15853.2
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- Published: August 2020
Integrated genomic view of SARS-CoV-2 in India
- DOI: 10.12688/wellcomeopenres.16119.1
- OpenAlex ID: https://openalex.org/W3047434813
- Published: August 2020
Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch
- DOI: 10.12688/wellcomeopenres.16661.2
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- Published: September 2021
Genome-wide microsatellite characteristics of five human <i>Plasmodium species</i>, focusing on <i>Plasmodium malariae</i> and <i>P. ovale curtisi</i>
- DOI: 10.1051/parasite/2020034
- OpenAlex ID: https://openalex.org/W3025159070
- Published: January 2020
16S rRNA metagenomic analysis of the bacterial community associated with turf grass seeds from low moisture and high moisture climates
- DOI: 10.7717/peerj.8417
- OpenAlex ID: https://openalex.org/W3000359824
- Published: January 2020
ProkEvo: an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses
- DOI: 10.7717/peerj.11376
- OpenAlex ID: https://openalex.org/W3162259148
- Published: May 2021
Classification model for accuracy and intrusion detection using machine learning approach
- DOI: 10.7717/peerj-cs.437
- OpenAlex ID: https://openalex.org/W3141436557
- Published: April 2021
Testing the Stability of Drug Resistance on Cryopreserved, Gene-Engineered Human Induced Pluripotent Stem Cells
- DOI: 10.3390/ph14090919
- OpenAlex ID: https://openalex.org/W3201227975
- Published: September 2021
A matter of background: DNA repair pathways as a possible cause for the sparse distribution of CRISPR-Cas systems in bacteria
- DOI: 10.1098/rstb.2018.0088
- OpenAlex ID: https://openalex.org/W2924349878
- Published: March 2019
Vocal learning in songbirds: the role of syllable order in song recognition
- DOI: 10.1098/rstb.2020.0248
- OpenAlex ID: https://openalex.org/W3198347044
- Published: September 2021
Animal blood in translational research: How to adjust animal blood viscosity to the human standard
- DOI: 10.14814/phy2.14880
- OpenAlex ID: https://openalex.org/W3165347384
- Published: May 2021
New Cross-Talks between Pathways Involved in Grapevine Infection with ‘Candidatus Phytoplasma solani’ Revealed by Temporal Network Modelling
- DOI: 10.3390/plants10040646
- OpenAlex ID: https://openalex.org/W3145386753
- Published: March 2021
Development of an Image Analysis Pipeline to Estimate Sphagnum Colony Density in the Field
- DOI: 10.3390/plants10050840
- OpenAlex ID: https://openalex.org/W3156710186
- Published: April 2021
High-throughput mapping of the phage resistance landscape in E. coli
- DOI: 10.1371/journal.pbio.3000877
- OpenAlex ID: https://openalex.org/W3092072294
- Published: October 2020
Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain
- DOI: 10.1371/journal.pbio.3001341
- OpenAlex ID: https://openalex.org/W3185300724
- Published: July 2021
Building blocks and blueprints for bacterial autolysins
- DOI: 10.1371/journal.pcbi.1008889
- OpenAlex ID: https://openalex.org/W3142736544
- Published: April 2021
Spatial synchronization codes from coupled rate-phase neurons
- DOI: 10.1371/journal.pcbi.1006741
- OpenAlex ID: https://openalex.org/W2914422575
- Published: January 2019
PDKit: A data science toolkit for the digital assessment of Parkinson’s Disease
- DOI: 10.1371/journal.pcbi.1008833
- OpenAlex ID: https://openalex.org/W3135510506
- Published: March 2021
Path Similarity Analysis: A Method for Quantifying Macromolecular Pathways
- DOI: 10.1371/journal.pcbi.1004568
- OpenAlex ID: https://openalex.org/W2096394554
- Published: October 2015
Data-driven classification of the certainty of scholarly assertions
- DOI: 10.7717/peerj.8871
- OpenAlex ID: https://openalex.org/W2954574950
- Published: April 2020
- Total mentions: 2
Measuring glycolytic flux in single yeast cells with an orthogonal synthetic biosensor
- DOI: 10.15252/msb.20199071
- OpenAlex ID: https://openalex.org/W2995307514
- Published: December 2019
Structural diversity of B-cell receptor repertoires along the B-cell differentiation axis in humans and mice
- DOI: 10.1371/journal.pcbi.1007636
- OpenAlex ID: https://openalex.org/W3008013978
- Published: February 2020
Incorporating the speciation process into species delimitation
- DOI: 10.1371/journal.pcbi.1008924
- OpenAlex ID: https://openalex.org/W3163112933
- Published: May 2021
Deep Neural Networks as a Computational Model for Human Shape Sensitivity
- DOI: 10.1371/journal.pcbi.1004896
- OpenAlex ID: https://openalex.org/W2343204383
- Published: April 2016
An extended catalogue of tandem alternative splice sites in human tissue transcriptomes
- DOI: 10.1371/journal.pcbi.1008329
- OpenAlex ID: https://openalex.org/W3140205218
- Published: April 2021
Transcriptional progression during meiotic prophase I reveals sex-specific features and X chromosome dynamics in human fetal female germline
- DOI: 10.1371/journal.pgen.1009773
- OpenAlex ID: https://openalex.org/W3197658049
- Published: September 2021
Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study
- DOI: 10.1371/journal.pgen.1009065
- OpenAlex ID: https://openalex.org/W3096814076
- Published: October 2020
Short-range template switching in great ape genomes explored using pair hidden Markov models
- DOI: 10.1371/journal.pgen.1009221
- OpenAlex ID: https://openalex.org/W3135444016
- Published: March 2021
Virus-derived variation in diverse human genomes
- DOI: 10.1371/journal.pgen.1009324
- OpenAlex ID: https://openalex.org/W3159425080
- Published: April 2021
Genomic rearrangements generate hypervariable mini-chromosomes in host-specific isolates of the blast fungus
- DOI: 10.1371/journal.pgen.1009386
- OpenAlex ID: https://openalex.org/W3131225712
- Published: February 2021
Genomic islands targeting dusA in Vibrio species are distantly related to Salmonella Genomic Island 1 and mobilizable by IncC conjugative plasmids
- DOI: 10.1371/journal.pgen.1009669
- OpenAlex ID: https://openalex.org/W3193761890
- Published: August 2021
The transcriptional landscape of Venezuelan equine encephalitis virus (TC-83) infection
- DOI: 10.1371/journal.pntd.0009306
- OpenAlex ID: https://openalex.org/W3142250062
- Published: March 2021
Analyzing the fine structure of distributions
- DOI: 10.1371/journal.pone.0238835
- OpenAlex ID: https://openalex.org/W2968048819
- Published: October 2020
Gut microbiota ecology: Biodiversity estimated from hybrid neutral-niche model increases with health status and aging
- DOI: 10.1371/journal.pone.0237207
- OpenAlex ID: https://openalex.org/W3096284913
- Published: October 2020
Differentiable molecular simulation can learn all the parameters in a coarse-grained force field for proteins
- DOI: 10.1371/journal.pone.0256990
- OpenAlex ID: https://openalex.org/W3198230876
- Published: September 2021
PyRates—A Python framework for rate-based neural simulations
- DOI: 10.1371/journal.pone.0225900
- OpenAlex ID: https://openalex.org/W2981870709
- Published: December 2019
Investigating the effect of dependence between conditions with Bayesian Linear Mixed Models for motif activity analysis
- DOI: 10.1371/journal.pone.0231824
- OpenAlex ID: https://openalex.org/W3021583682
- Published: May 2020
Transcriptomic correlates of electrophysiological and morphological diversity within and across excitatory and inhibitory neuron classes
- DOI: 10.1371/journal.pcbi.1007113
- OpenAlex ID: https://openalex.org/W2952227234
- Published: June 2019
Exploring the Role of Osteosarcoma-Derived Extracellular Vesicles in Pre-Metastatic Niche Formation and Metastasis in the 143-B Xenograft Mouse Osteosarcoma Model
- DOI: 10.3390/cancers12113457
- OpenAlex ID: https://openalex.org/W3101287026
- Published: November 2020
Landscape of Bone Marrow Metastasis in Human Neuroblastoma Unraveled by Transcriptomics and Deep Multiplex Imaging
- DOI: 10.3390/cancers13174311
- OpenAlex ID: https://openalex.org/W3195873947
- Published: August 2021
Cooperative Blockade of CK2 and ATM Kinases Drives Apoptosis in VHL-Deficient Renal Carcinoma Cells through ROS Overproduction
- DOI: 10.3390/cancers13030576
- OpenAlex ID: https://openalex.org/W3126147542
- Published: February 2021
Deep Learning Prediction of Cancer Prevalence from Satellite Imagery
- DOI: 10.3390/cancers12123844
- OpenAlex ID: https://openalex.org/W3116896707
- Published: December 2020
Longitudinal Changes of Quality of Life and Hearing Following Radiosurgery for Vestibular Schwannoma
- DOI: 10.3390/cancers13061315
- OpenAlex ID: https://openalex.org/W3138148047
- Published: March 2021
Role for the Histone Demethylase KDM4B in Rhabdomyosarcoma via CDK6 and CCNA2: Compensation by KDM4A and Apoptotic Response of Targeting Both KDM4B and KDM4A
- DOI: 10.3390/cancers13071734
- OpenAlex ID: https://openalex.org/W3142871899
- Published: April 2021
Microbial exposure during early human development primes fetal immune cells
- DOI: 10.1016/j.cell.2021.04.039
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- Published: June 2021
Molecular subtype-specific responses of colon cancer cells to the SMAC mimetic Birinapant
- DOI: 10.1038/s41419-020-03232-z
- OpenAlex ID: https://openalex.org/W3106549852
- Published: November 2020
Microanatomic Distribution of Myeloid Heme Oxygenase-1 Protects against Free Radical-Mediated Immunopathology in Human Tuberculosis
- DOI: 10.1016/j.celrep.2018.10.073
- OpenAlex ID: https://openalex.org/W2901673493
- Published: November 2018
Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas
- DOI: 10.1016/j.celrep.2018.03.046
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MicroRNAs and Mammarenaviruses: Modulating Cellular Metabolism
- DOI: 10.3390/cells9112525
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- Published: November 2020
A Multimodal Platform for Simultaneous T-cell Imaging, Defined Activation, and Mechanobiological Characterization
- DOI: 10.3390/cells10020235
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- Published: January 2021
Gut Microbiome Changes in Patients with Active Left-Sided Ulcerative Colitis after Fecal Microbiome Transplantation and Topical 5-aminosalicylic Acid Therapy
- DOI: 10.3390/cells9102283
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- Published: October 2020
Kinetics of Anti-SARS-CoV-2 Antibody Responses 3 Months Post Complete Vaccination with BNT162b2; A Prospective Study in 283 Health Workers
- DOI: 10.3390/cells10081942
- OpenAlex ID: https://openalex.org/W3190687233
- Published: July 2021
Time-resolved proteomic analysis of quorum sensing in Vibrio harveyi
- DOI: 10.1039/c5sc03340c
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Clinical evaluation of Bladder CARE, a new epigenetic test for bladder cancer detection in urine samples
- DOI: 10.1186/s13148-021-01029-1
- OpenAlex ID: https://openalex.org/W3155611262
- Published: April 2021
Multiplexed imaging analysis of the tumor-immune microenvironment reveals predictors of outcome in triple-negative breast cancer
- DOI: 10.1038/s42003-021-02361-1
- OpenAlex ID: https://openalex.org/W3182552500
- Published: July 2021
DNA methylation changes during long-term in vitro cell culture are caused by epigenetic drift
- DOI: 10.1038/s42003-021-02116-y
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- Published: May 2021
Temporal hierarchy of intrinsic neural timescales converges with spatial core-periphery organization
- DOI: 10.1038/s42003-021-01785-z
- OpenAlex ID: https://openalex.org/W3133510527
- Published: March 2021
Host-parasite tissue adhesion by a secreted type of β-1,4-glucanase in the parasitic plant Phtheirospermum japonicum
- DOI: 10.1038/s42003-020-01143-5
- OpenAlex ID: https://openalex.org/W3046007451
- Published: July 2020
Pseudomonas aeruginosa adapts to octenidine via a combination of efflux and membrane remodelling
- DOI: 10.1038/s42003-021-02566-4
- OpenAlex ID: https://openalex.org/W3197866041
- Published: September 2021
A novel hand-crafted with deep learning features based fusion model for COVID-19 diagnosis and classification using chest X-ray images
- DOI: 10.1007/s40747-020-00216-6
- OpenAlex ID: https://openalex.org/W3106225991
- Published: November 2020
- Total mentions: 2
Virulence factor-related gut microbiota genes and immunoglobulin A levels as novel markers for machine learning-based classification of autism spectrum disorder
- DOI: 10.1016/j.csbj.2020.12.012
- OpenAlex ID: https://openalex.org/W3114106541
- Published: January 2021
Structural binding site comparisons reveal Crizotinib as a novel LRRK2 inhibitor
- DOI: 10.1016/j.csbj.2021.06.013
- OpenAlex ID: https://openalex.org/W3172278046
- Published: January 2021
Damage-Net: A program for DNA repair meta-analysis identifies a network of novel repair genes that facilitate cancer evolution
- DOI: 10.1016/j.dnarep.2021.103158
- OpenAlex ID: https://openalex.org/W3170967313
- Published: September 2021
LittleBrain: A gradient-based tool for the topographical interpretation of cerebellar neuroimaging findings
- DOI: 10.1371/journal.pone.0210028
- OpenAlex ID: https://openalex.org/W2951379231
- Published: January 2019
- Total mentions: 2
Dataset on structure and physical properties of stable diatomic systems based on van der Waals density functional method
- DOI: 10.1016/j.dib.2021.106968
- OpenAlex ID: https://openalex.org/W3137103048
- Published: June 2021
Automated CT Lung Density Analysis of Viral Pneumonia and Healthy Lungs Using Deep Learning-Based Segmentation, Histograms and HU Thresholds
- DOI: 10.3390/diagnostics11050738
- OpenAlex ID: https://openalex.org/W3152958266
- Published: April 2021
GIST and Ghrelin: To Be or Not to Be?
- DOI: 10.3390/diagnostics11081361
- OpenAlex ID: https://openalex.org/W3186185583
- Published: July 2021
The interactome of <scp>KRAB</scp> zinc finger proteins reveals the evolutionary history of their functional diversification
- DOI: 10.15252/embj.2018101220
- OpenAlex ID: https://openalex.org/W2967767587
- Published: August 2019
Behaviours and attitudes in response to the COVID-19 pandemic: insights from a cross-national Facebook survey
- DOI: 10.1140/epjds/s13688-021-00270-1
- OpenAlex ID: https://openalex.org/W3152849611
- Published: April 2021
Influence Cascades: Entropy-Based Characterization of Behavioral Influence Patterns in Social Media
- DOI: 10.3390/e23020160
- OpenAlex ID: https://openalex.org/W3125790831
- Published: January 2021
Computing Integrated Information (Φ) in Discrete Dynamical Systems with Multi-Valued Elements
- DOI: 10.3390/e23010006
- OpenAlex ID: https://openalex.org/W3115662350
- Published: December 2020
Identification and catalytic properties of new epoxide hydrolases from the genomic data of soil bacteria
- DOI: 10.1016/j.enzmictec.2020.109592
- OpenAlex ID: https://openalex.org/W3024409056
- Published: September 2020
Kernel-density estimation and approximate Bayesian computation for flexible epidemiological model fitting in Python
- DOI: 10.1016/j.epidem.2018.05.009
- OpenAlex ID: https://openalex.org/W2804308277
- Published: December 2018
An Interpretable Predictive Model of Vaccine Utilization for Tanzania
- DOI: 10.3389/frai.2020.559617
- OpenAlex ID: https://openalex.org/W3095596475
- Published: October 2020
Experimental and Model-Based Analysis to Optimize Microalgal Biomass Productivity in a Pilot-Scale Tubular Photobioreactor
- DOI: 10.3389/fbioe.2020.00453
- OpenAlex ID: https://openalex.org/W3024403852
- Published: May 2020
AI Aided Design of Epitope-Based Vaccine for the Induction of Cellular Immune Responses Against SARS-CoV-2
- DOI: 10.3389/fgene.2021.602196
- OpenAlex ID: https://openalex.org/W3146228426
- Published: March 2021
SARS-CoV-2 Causes a Different Cytokine Response Compared to Other Cytokine Storm-Causing Respiratory Viruses in Severely Ill Patients
- DOI: 10.3389/fimmu.2021.629193
- OpenAlex ID: https://openalex.org/W3134608058
- Published: March 2021
JunB Controls Intestinal Effector Programs in Regulatory T Cells
- DOI: 10.3389/fimmu.2020.00444
- OpenAlex ID: https://openalex.org/W3014613741
- Published: March 2020
Clinical and Immunological Factors That Distinguish COVID-19 From Pandemic Influenza A(H1N1)
- DOI: 10.3389/fimmu.2021.593595
- OpenAlex ID: https://openalex.org/W3155841218
- Published: April 2021
The Immune and Non-Immune Pathways That Drive Chronic Gastrointestinal Helminth Burdens in the Wild
- DOI: 10.3389/fimmu.2018.00056
- OpenAlex ID: https://openalex.org/W2788599483
- Published: February 2018
Data on the verification and validation of segmentation and registration methods for diffusion MRI
- DOI: 10.1016/j.dib.2016.06.049
- OpenAlex ID: https://openalex.org/W2461046477
- Published: September 2016
Metabolic Engineering Strategies in Diatoms Reveal Unique Phenotypes and Genetic Configurations With Implications for Algal Genetics and Synthetic Biology
- DOI: 10.3389/fbioe.2020.00513
- OpenAlex ID: https://openalex.org/W3033166726
- Published: June 2020
Wnt Signaling Induces Asymmetric Dynamics in the Actomyosin Cortex of the C. elegans Endomesodermal Precursor Cell
- DOI: 10.3389/fcell.2021.702741
- OpenAlex ID: https://openalex.org/W3199656250
- Published: September 2021
A Dissociation of Attention, Executive Function and Reaction to Difficulty: Development of the MindPulse Test, a Novel Digital Neuropsychological Test for Precise Quantification of Perceptual-Motor Decision-Making Processes
- DOI: 10.3389/fnins.2021.650219
- OpenAlex ID: https://openalex.org/W3186507836
- Published: July 2021
Prediction of Post-hepatectomy Liver Failure in Patients With Hepatocellular Carcinoma Based on Radiomics Using Gd-EOB-DTPA-Enhanced MRI: The Liver Failure Model
- DOI: 10.3389/fonc.2021.605296
- OpenAlex ID: https://openalex.org/W3133524012
- Published: March 2021
Uncovering the Mechanisms of Chinese Herbal Medicine (MaZiRenWan) for Functional Constipation by Focused Network Pharmacology Approach
- DOI: 10.3389/fphar.2018.00270
- OpenAlex ID: https://openalex.org/W2792209933
- Published: March 2018
Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
- DOI: 10.3389/fpls.2019.01249
- OpenAlex ID: https://openalex.org/W2979584579
- Published: October 2019
Comorbid Chronic Pain and Depression: Shared Risk Factors and Differential Antidepressant Effectiveness
- DOI: 10.3389/fpsyt.2021.643609
- OpenAlex ID: https://openalex.org/W3155755292
- Published: April 2021
Global Forecasting Confirmed and Fatal Cases of COVID-19 Outbreak Using Autoregressive Integrated Moving Average Model
- DOI: 10.3389/fpubh.2020.580327
- OpenAlex ID: https://openalex.org/W3094686502
- Published: October 2020
Mechanisms of PTPσ-Mediated Presynaptic Differentiation
- DOI: 10.3389/fnsyn.2019.00017
- OpenAlex ID: https://openalex.org/W2945042530
- Published: May 2019
Gene Regulatory Network Rewiring in the Immune Cells Associated with Cancer
- DOI: 10.3390/genes8110308
- OpenAlex ID: https://openalex.org/W2767452318
- Published: November 2017
Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment
- DOI: 10.1186/s13059-017-1186-2
- OpenAlex ID: https://openalex.org/W2599102161
- Published: March 2017
CRISPRO: identification of functional protein coding sequences based on genome editing dense mutagenesis
- DOI: 10.1186/s13059-018-1563-5
- OpenAlex ID: https://openalex.org/W2803340220
- Published: October 2018
CellTag Indexing: genetic barcode-based sample multiplexing for single-cell genomics
- DOI: 10.1186/s13059-019-1699-y
- OpenAlex ID: https://openalex.org/W2946902586
- Published: May 2019
Contiguous and stochastic CHH methylation patterns of plant DRM2 and CMT2 revealed by single-read methylome analysis
- DOI: 10.1186/s13059-020-02099-9
- OpenAlex ID: https://openalex.org/W3047860259
- Published: August 2020
Absent from DNA and protein: genomic characterization of nullomers and nullpeptides across functional categories and evolution
- DOI: 10.1186/s13059-021-02459-z
- OpenAlex ID: https://openalex.org/W3193943505
- Published: August 2021
Homoeolog Inference Methods Requiring Bidirectional Best Hits or Synteny Miss Many Pairs
- DOI: 10.1093/gbe/evab077
- OpenAlex ID: https://openalex.org/W3154299081
- Published: April 2021
Evolving neoantigen profiles in colorectal cancers with DNA repair defects
- DOI: 10.1186/s13073-019-0654-6
- OpenAlex ID: https://openalex.org/W2954515247
- Published: June 2019
Genome diversity in Ukraine
- DOI: 10.1093/gigascience/giaa159
- OpenAlex ID: https://openalex.org/W3119040639
- Published: January 2021
Fine needle aspirates comprehensively sample intrahepatic immunity
- DOI: 10.1136/gutjnl-2018-317071
- OpenAlex ID: https://openalex.org/W2902075768
- Published: November 2018
Recommended care and care adherence following a diagnosis of Lynch syndrome: a mixed-methods study
- DOI: 10.1186/s13053-019-0130-8
- OpenAlex ID: https://openalex.org/W2995096170
- Published: December 2019
Neotropical ant-plant Triplaris americana attracts Pseudomyrmex mordax ant queens during seedling stages
- DOI: 10.1007/s00040-017-0542-2
- OpenAlex ID: https://openalex.org/W2587622730
- Published: February 2017
Tracing the Invasion and Expansion Characteristics of the Flatid Planthopper, Metcalfa pruinosa (Hemiptera: Flatidae), in Korea Using Mitochondrial DNA Sequences
- DOI: 10.3390/insects12010004
- OpenAlex ID: https://openalex.org/W3117157037
- Published: December 2020
Insights on the Evolutionary Genomics of the Blautia Genus: Potential New Species and Genetic Content Among Lineages
- DOI: 10.3389/fmicb.2021.660920
- OpenAlex ID: https://openalex.org/W3157826070
- Published: April 2021
Exploring the Antibiotic Resistance Burden in Livestock, Livestock Handlers and Their Non-Livestock Handling Contacts: A One Health Perspective
- DOI: 10.3389/fmicb.2021.651461
- OpenAlex ID: https://openalex.org/W3156985544
- Published: April 2021
Automated, Efficient, and Accelerated Knowledge Modeling of the Cognitive Neuroimaging Literature Using the ATHENA Toolkit
- DOI: 10.3389/fnins.2019.00494
- OpenAlex ID: https://openalex.org/W2943801987
- Published: May 2019
Total Genotype Score Modelling of Polygenic Endurance-Power Profiles in Lithuanian Elite Athletes
- DOI: 10.3390/genes12071067
- OpenAlex ID: https://openalex.org/W3178189326
- Published: July 2021
A Model of Electrically Stimulated Auditory Nerve Fiber Responses with Peripheral and Central Sites of Spike Generation
- DOI: 10.1007/s10162-016-0608-2
- OpenAlex ID: https://openalex.org/W2569360263
- Published: January 2017
Specific MiRNAs in naïve T cells associated with Hepatitis C Virus-induced Hepatocellular Carcinoma
- DOI: 10.7150/jca.49594
- OpenAlex ID: https://openalex.org/W3097083760
- Published: January 2021
Hallmark microRNA signature in liquid biopsy identifies hepatocellular carcinoma and differentiates it from liver metastasis
- DOI: 10.7150/jca.59933
- OpenAlex ID: https://openalex.org/W3170699963
- Published: January 2021
ChemSAR: an online pipelining platform for molecular SAR modeling
- DOI: 10.1186/s13321-017-0215-1
- OpenAlex ID: https://openalex.org/W2610807327
- Published: May 2017
TeachOpenCADD: a teaching platform for computer-aided drug design using open source packages and data
- DOI: 10.1186/s13321-019-0351-x
- OpenAlex ID: https://openalex.org/W2940819419
- Published: April 2019
Randomized SMILES strings improve the quality of molecular generative models
- DOI: 10.1186/s13321-019-0393-0
- OpenAlex ID: https://openalex.org/W2989615256
- Published: November 2019
Structure‐based identification of dual ligands at the A2AR and PDE10A with anti‐proliferative effects in lung cancer cell‐lines
- DOI: 10.1186/s13321-021-00492-5
- OpenAlex ID: https://openalex.org/W3135691966
- Published: March 2021
Learning protein-ligand binding affinity with atomic environment vectors
- DOI: 10.1186/s13321-021-00536-w
- OpenAlex ID: https://openalex.org/W3194618792
- Published: August 2021
Risk of Adverse Drug Events Following the Virtual Addition of COVID-19 Repurposed Drugs to Drug Regimens of Frail Older Adults with Polypharmacy
- DOI: 10.3390/jcm9082591
- OpenAlex ID: https://openalex.org/W3048010528
- Published: August 2020
Spinal Cord Morphology in Degenerative Cervical Myelopathy Patients; Assessing Key Morphological Characteristics Using Machine Vision Tools
- DOI: 10.3390/jcm10040892
- OpenAlex ID: https://openalex.org/W3130791876
- Published: February 2021
Prediction of Neurologically Intact Survival in Cardiac Arrest Patients without Pre-Hospital Return of Spontaneous Circulation: Machine Learning Approach
- DOI: 10.3390/jcm10051089
- OpenAlex ID: https://openalex.org/W3134698835
- Published: March 2021
Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples
- DOI: 10.1128/JCM.01822-19
- OpenAlex ID: https://openalex.org/W2996018551
- Published: February 2020
Drivers of within-host genetic diversity in acute infections of viruses
- DOI: 10.1371/journal.ppat.1009029
- OpenAlex ID: https://openalex.org/W3097309502
- Published: November 2020
Endogenous variation in ventromedial prefrontal cortex state dynamics during naturalistic viewing reflects affective experience
- DOI: 10.1126/sciadv.abf7129
- OpenAlex ID: https://openalex.org/W3152665355
- Published: April 2021
Activation and inhibition of tph2 serotonergic neurons operate in tandem to influence larval zebrafish preference for light over darkness
- DOI: 10.1038/srep20788
- OpenAlex ID: https://openalex.org/W2404416712
- Published: February 2016
H3.3 demarcates GC-rich coding and subtelomeric regions and serves as potential memory mark for virulence gene expression in Plasmodium falciparum
- DOI: 10.1038/srep31965
- OpenAlex ID: https://openalex.org/W2514069030
- Published: August 2016
Facile single-stranded DNA sequencing of human plasma DNA via thermostable group II intron reverse transcriptase template switching
- DOI: 10.1038/s41598-017-09064-w
- OpenAlex ID: https://openalex.org/W2742306551
- Published: August 2017
Chronic helminth infection burden differentially affects haematopoietic cell development while ageing selectively impairs adaptive responses to infection
- DOI: 10.1038/s41598-018-22083-5
- OpenAlex ID: https://openalex.org/W2792640567
- Published: February 2018
Instant Clue: A Software Suite for Interactive Data Visualization and Analysis
- DOI: 10.1038/s41598-018-31154-6
- OpenAlex ID: https://openalex.org/W2887324870
- Published: August 2018
Using Drosophila behavioral assays to characterize terebrid venom-peptide bioactivity
- DOI: 10.1038/s41598-018-33215-2
- OpenAlex ID: https://openalex.org/W2950798493
- Published: October 2018
Flexible updating of dynamic knowledge structures
- DOI: 10.1038/s41598-019-39468-9
- OpenAlex ID: https://openalex.org/W2892099073
- Published: February 2019
Environmental structure drives resistance to phages and antibiotics during phage therapy and to invading lysogens during colonisation
- DOI: 10.1038/s41598-019-39773-3
- OpenAlex ID: https://openalex.org/W2917868694
- Published: February 2019
Insight into the genome and brackish water adaptation strategies of toxic and bloom-forming Baltic Sea Dolichospermum sp. UHCC 0315
- DOI: 10.1038/s41598-019-40883-1
- OpenAlex ID: https://openalex.org/W2924964326
- Published: March 2019
Temporal Stability of the Ruminal Bacterial Communities in Beef Steers
- DOI: 10.1038/s41598-019-45995-2
- OpenAlex ID: https://openalex.org/W2953930657
- Published: July 2019
Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria
- DOI: 10.1038/s41598-019-47857-3
- OpenAlex ID: https://openalex.org/W2966084642
- Published: August 2019
Transcriptomic analysis reveals new hippocampal gene networks induced by prolactin
- DOI: 10.1038/s41598-019-50228-7
- OpenAlex ID: https://openalex.org/W2975482775
- Published: September 2019
Impact of a 40-Gene Targeted Panel Test on Physician Decision Making for Patients With Acute Myeloid Leukemia
- DOI: 10.1200/PO.20.00182
- OpenAlex ID: https://openalex.org/W3118781850
- Published: November 2021
Neurophysiological Correlates of Concussion: Deep Learning for Clinical Assessment
- DOI: 10.1038/s41598-019-53751-9
- OpenAlex ID: https://openalex.org/W2991373402
- Published: November 2019
Murine xenograft bioreactors for human immunopeptidome discovery
- DOI: 10.1038/s41598-019-54700-2
- OpenAlex ID: https://openalex.org/W2992193520
- Published: December 2019
Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties
- DOI: 10.1038/s41598-019-55777-5
- OpenAlex ID: https://openalex.org/W2995900046
- Published: December 2019
Rumen Bacteria and Serum Metabolites Predictive of Feed Efficiency Phenotypes in Beef Cattle
- DOI: 10.1038/s41598-019-55978-y
- OpenAlex ID: https://openalex.org/W2996559629
- Published: December 2019
A Novel System for Functional Determination of Variants of Uncertain Significance using Deep Convolutional Neural Networks
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- OpenAlex ID: https://openalex.org/W3009270032
- Published: March 2020
Correlation-centred variable selection of a gene expression signature to predict breast cancer metastasis
- DOI: 10.1038/s41598-020-64870-z
- OpenAlex ID: https://openalex.org/W3025802818
- Published: May 2020
Multi-classifier prediction of knee osteoarthritis progression from incomplete imbalanced longitudinal data
- DOI: 10.1038/s41598-020-64643-8
- OpenAlex ID: https://openalex.org/W3028355634
- Published: May 2020
liputils: a Python module to manage individual fatty acid moieties from complex lipids
- DOI: 10.1038/s41598-020-70259-9
- OpenAlex ID: https://openalex.org/W3047678874
- Published: August 2020
Reconstruction and analysis of genome-scale metabolic model of weak Crabtree positive yeast Lachancea kluyveri
- DOI: 10.1038/s41598-020-73253-3
- OpenAlex ID: https://openalex.org/W3090945428
- Published: October 2020
A comparative analysis for spatio-temporal spreading patterns of emergency news
- DOI: 10.1038/s41598-020-76162-7
- OpenAlex ID: https://openalex.org/W3102299381
- Published: November 2020
Early risk assessment for COVID-19 patients from emergency department data using machine learning
- DOI: 10.1038/s41598-021-83784-y
- OpenAlex ID: https://openalex.org/W3130958407
- Published: February 2021
Predicting the membrane permeability of organic fluorescent probes by the deep neural network based lipophilicity descriptor DeepFl-LogP
- DOI: 10.1038/s41598-021-86460-3
- OpenAlex ID: https://openalex.org/W3136290781
- Published: March 2021
Interpretable deep recommender system model for prediction of kinase inhibitor efficacy across cancer cell lines
- DOI: 10.1038/s41598-021-94564-z
- OpenAlex ID: https://openalex.org/W3189729408
- Published: August 2021
Validation of Wireless Sensors for Psychophysiological Studies
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- OpenAlex ID: https://openalex.org/W2986286432
- Published: November 2019
Robust Cylindrical Panorama Stitching for Low-Texture Scenes Based on Image Alignment Using Deep Learning and Iterative Optimization
- DOI: 10.3390/s19235310
- OpenAlex ID: https://openalex.org/W2989927550
- Published: December 2019
Heart Rate Variability and Accelerometry as Classification Tools for Monitoring Perceived Stress Levels—A Pilot Study on Firefighters
- DOI: 10.3390/s20102834
- OpenAlex ID: https://openalex.org/W3025201136
- Published: May 2020
A Benchmark of Data Stream Classification for Human Activity Recognition on Connected Objects
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- OpenAlex ID: https://openalex.org/W3099352023
- Published: November 2020
Classification of Skin Disease Using Deep Learning Neural Networks with MobileNet V2 and LSTM
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- Published: April 2021
An Evaluation of Motion Trackers with Virtual Reality Sensor Technology in Comparison to a Marker-Based Motion Capture System Based on Joint Angles for Ergonomic Risk Assessment
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- OpenAlex ID: https://openalex.org/W3159956809
- Published: May 2021
Effects of sampling strategy and DNA extraction on human skin microbiome investigations
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- OpenAlex ID: https://openalex.org/W2990954008
- Published: November 2019
Early and accurate detection and diagnosis of heart disease using intelligent computational model
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An Analysis of Sport-Specific Pain Symptoms through Inter-Individual Training Differences in CrossFit
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- Published: May 2021
A panel of selected serum protein biomarkers for the detection of aggressive prostate cancer
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- Published: January 2021
Phylogenomic Analysis of Secondary Metabolism in the Toxic Cyanobacterial Genera Anabaena, Dolichospermum and Aphanizomenon
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A Near-Complete Haplotype-Phased Genome of the Dikaryotic Wheat Stripe Rust Fungus <i>Puccinia striiformis</i> f. sp. <i>tritici</i> Reveals High Interhaplotype Diversity
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Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria
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- Published: August 2021
Inhibiting Type VI Secretion System Activity with a Biomimetic Peptide Designed To Target the Baseplate Wedge Complex
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Identification of Primary Antimicrobial Resistance Drivers in Agricultural Nontyphoidal Salmonella enterica Serovars by Using Machine Learning
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- OpenAlex ID: https://openalex.org/W2966712205
- Published: August 2019
Subspecies Niche Specialization in the Oral Microbiome Is Associated with Nasopharyngeal Carcinoma Risk
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- Published: August 2020
Evaluating Organism-Wide Changes in the Metabolome and Microbiome following a Single Dose of Antibiotic
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The dynamic conformational landscape of the protein methyltransferase SETD8
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Distribution of neurosensory progenitor pools during inner ear morphogenesis unveiled by cell lineage reconstruction
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Persistent epigenetic memory impedes rescue of the telomeric phenotype in human ICF iPSCs following DNMT3B correction
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- OpenAlex ID: https://openalex.org/W2988079525
- Published: November 2019
HIV-1 uncoating by release of viral cDNA from capsid-like structures in the nucleus of infected cells
- DOI: 10.7554/eLife.64776
- OpenAlex ID: https://openalex.org/W3157519922
- Published: April 2021
The effect of hybridization on transposable element accumulation in an undomesticated fungal species
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- OpenAlex ID: https://openalex.org/W3087203353
- Published: September 2020
Respiratory syncytial virus co-opts host mitochondrial function to favour infectious virus production
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- OpenAlex ID: https://openalex.org/W2955030790
- Published: June 2019
Global alignment and assessment of TRP channel transmembrane domain structures to explore functional mechanisms
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- OpenAlex ID: https://openalex.org/W3056315374
- Published: August 2020
Circular synthesized CRISPR/Cas gRNAs for functional interrogations in the coding and noncoding genome
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- OpenAlex ID: https://openalex.org/W2919380816
- Published: March 2019
SON and SRRM2 are essential for nuclear speckle formation
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- Published: October 2020
The Promise of Sleep: A Multi-Sensor Approach for Accurate Sleep Stage Detection Using the Oura Ring
- DOI: 10.3390/s21134302
- OpenAlex ID: https://openalex.org/W3175097477
- Published: June 2021
Biased Ligands Differentially Shape the Conformation of the Extracellular Loop Region in 5-HT2B Receptors
- DOI: 10.3390/ijms21249728
- OpenAlex ID: https://openalex.org/W3116039714
- Published: December 2020
Machine Learning Analysis of Longevity-Associated Gene Expression Landscapes in Mammals
- DOI: 10.3390/ijms22031073
- OpenAlex ID: https://openalex.org/W3122292144
- Published: January 2021
Integration of Data from Liquid–Liquid Phase Separation Databases Highlights Concentration and Dosage Sensitivity of LLPS Drivers
- DOI: 10.3390/ijms22063017
- OpenAlex ID: https://openalex.org/W3138274236
- Published: March 2021
Distinct Age-Specific miRegulome Profiling of Isolated Small and Large Intestinal Epithelial Cells in Mice
- DOI: 10.3390/ijms22073544
- OpenAlex ID: https://openalex.org/W3147478587
- Published: March 2021
Compatibility of Distinct Label-Free Proteomic Workflows in Absolute Quantification of Proteins Linked to the Oocyte Quality in Human Follicular Fluid
- DOI: 10.3390/ijms22147415
- OpenAlex ID: https://openalex.org/W3183076547
- Published: July 2021
Transcriptomic and Metabolic Network Analysis of Metabolic Reprogramming and IGF-1 Modulation in SCA3 Transgenic Mice
- DOI: 10.3390/ijms22157974
- OpenAlex ID: https://openalex.org/W3185233569
- Published: July 2021
q2-sample-classifier: machine-learning tools for microbiome classification and regression
- DOI: 10.21105/joss.00934
- OpenAlex ID: https://openalex.org/W2953236953
- Published: October 2018
Neural tube patterning: From a minimal model for rostrocaudal patterning toward an integrated 3D model
- DOI: 10.1016/j.isci.2021.102559
- OpenAlex ID: https://openalex.org/W3163325975
- Published: June 2021
Analog-sensitive cell line identifies cellular substrates of CDK9
- DOI: 10.18632/oncotarget.27334
- OpenAlex ID: https://openalex.org/W2998139391
- Published: December 2019
Mathematical models of amino acid panel for assisting diagnosis of children acute leukemia
- DOI: 10.1186/s12967-019-1783-9
- OpenAlex ID: https://openalex.org/W2916748362
- Published: January 2019
What, If Anything, Is Rodent Prefrontal Cortex?
- DOI: 10.1523/ENEURO.0315-18.2018
- OpenAlex ID: https://openalex.org/W2896605400
- Published: September 2018
Time Course of Alterations in Adult Spinal Motoneuron Properties in the SOD1(G93A) Mouse Model of ALS
- DOI: 10.1523/ENEURO.0378-20.2021
- OpenAlex ID: https://openalex.org/W3133197850
- Published: February 2021
Electrophysiological Frequency Band Ratio Measures Conflate Periodic and Aperiodic Neural Activity
- DOI: 10.1523/ENEURO.0192-20.2020
- OpenAlex ID: https://openalex.org/W3089047745
- Published: September 2020
Estimation of Olfactory Sensitivity Using a Bayesian Adaptive Method
- DOI: 10.3390/nu11061278
- OpenAlex ID: https://openalex.org/W2913269021
- Published: June 2019
An Innovative Machine Learning Approach to Predict the Dietary Fiber Content of Packaged Foods
- DOI: 10.3390/nu13093195
- OpenAlex ID: https://openalex.org/W3201016286
- Published: September 2021
The Influence of Met Receptor Level on HGF-Induced Glycolytic Reprogramming in Head and Neck Squamous Cell Carcinoma
- DOI: 10.3390/ijms21020471
- OpenAlex ID: https://openalex.org/W2998931141
- Published: January 2020
The lipid elongation enzyme ELOVL2 is a molecular regulator of aging in the retina
- DOI: 10.1111/acel.13100
- OpenAlex ID: https://openalex.org/W2998824887
- Published: January 2020
Prediction of Molecular Properties Using Molecular Topographic Map
- DOI: 10.3390/molecules26154475
- OpenAlex ID: https://openalex.org/W3186395753
- Published: July 2021
ACE2‐Variants Indicate Potential SARS‐CoV‐2‐Susceptibility in Animals: A Molecular Dynamics Study
- DOI: 10.1002/minf.202100031
- OpenAlex ID: https://openalex.org/W3190414574
- Published: August 2021
Benchmarking HLA genotyping and clarifying HLA impact on survival in tumor immunotherapy
- DOI: 10.1002/1878-0261.12895
- OpenAlex ID: https://openalex.org/W3121122737
- Published: January 2021
Characterization of fragment sizes, copy number aberrations and 4‐mer end motifs in cell‐free DNA of hepatocellular carcinoma for enhanced liquid biopsy‐based cancer detection
- DOI: 10.1002/1878-0261.13041
- OpenAlex ID: https://openalex.org/W3167979860
- Published: July 2021
Phosphoproteomics identifies microglial Siglec‐F inflammatory response during neurodegeneration
- DOI: 10.15252/msb.20209819
- OpenAlex ID: https://openalex.org/W3111808177
- Published: December 2020
Joint cell segmentation and cell type annotation for spatial transcriptomics
- DOI: 10.15252/msb.202010108
- OpenAlex ID: https://openalex.org/W3165800492
- Published: May 2021
Protein quality control and regulated proteolysis in the genome‐reduced organism <i>Mycoplasma pneumoniae</i>
- DOI: 10.15252/msb.20209530
- OpenAlex ID: https://openalex.org/W3112326989
- Published: December 2020
Application of alternative <i>de novo</i> motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA2 binding sites
- DOI: 10.18699/VJ21.002
- OpenAlex ID: https://openalex.org/W3136722644
- Published: March 2021
Sequence-structure-function relationships in class I MHC: A local frustration perspective
- DOI: 10.1371/journal.pone.0232849
- OpenAlex ID: https://openalex.org/W3027960481
- Published: May 2020
Supply-side options to reduce land requirements of fully renewable electricity in Europe
- DOI: 10.1371/journal.pone.0236958
- OpenAlex ID: https://openalex.org/W3048055966
- Published: August 2020
The citation advantage of linking publications to research data
- DOI: 10.1371/journal.pone.0230416
- OpenAlex ID: https://openalex.org/W2955244474
- Published: April 2020
Accuracy and Reliability of the Kinect Version 2 for Clinical Measurement of Motor Function
- DOI: 10.1371/journal.pone.0166532
- OpenAlex ID: https://openalex.org/W2556558971
- Published: November 2016
Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
- DOI: 10.1371/journal.pone.0250282
- OpenAlex ID: https://openalex.org/W3158720664
- Published: April 2021
Catch composition and life history characteristics of sharks and rays (Elasmobranchii) landed in the Andaman and Nicobar Islands, India
- DOI: 10.1371/journal.pone.0231069
- OpenAlex ID: https://openalex.org/W3096398273
- Published: October 2020
Automatic crack detection method for loaded coal in vibration failure process
- DOI: 10.1371/journal.pone.0185750
- OpenAlex ID: https://openalex.org/W2762043308
- Published: October 2017
Polish is quantitatively different on quartzite flakes used on different worked materials
- DOI: 10.1371/journal.pone.0243295
- OpenAlex ID: https://openalex.org/W3107410546
- Published: December 2020
Is Neural Activity Detected by ERP-Based Brain-Computer Interfaces Task Specific?
- DOI: 10.1371/journal.pone.0165556
- OpenAlex ID: https://openalex.org/W2542349403
- Published: October 2016
Characterization of Multi-Drug Resistant Enterococcus faecalis Isolated from Cephalic Recording Chambers in Research Macaques (Macaca spp.)
- DOI: 10.1371/journal.pone.0169293
- OpenAlex ID: https://openalex.org/W2572756616
- Published: January 2017
On transformative adaptive activation functions in neural networks for gene expression inference
- DOI: 10.1371/journal.pone.0243915
- OpenAlex ID: https://openalex.org/W3121056988
- Published: January 2021
Artificial intelligence may offer insight into factors determining individual TSH level
- DOI: 10.1371/journal.pone.0233336
- OpenAlex ID: https://openalex.org/W3027760840
- Published: May 2020
Transcriptomic Drivers of Differentiation, Maturation, and Polyploidy in Human Extravillous Trophoblast
- DOI: 10.3389/fcell.2021.702046
- OpenAlex ID: https://openalex.org/W3197871591
- Published: September 2021
Task-Related Synaptic Changes Localized to Small Neuronal Population in Recurrent Neural Network Cortical Models
- DOI: 10.3389/fncom.2018.00083
- OpenAlex ID: https://openalex.org/W2895393903
- Published: October 2018
Gene Loss, Pseudogenization in Plastomes of Genus Allium (Amaryllidaceae), and Putative Selection for Adaptation to Environmental Conditions
- DOI: 10.3389/fgene.2021.674783
- OpenAlex ID: https://openalex.org/W3179283229
- Published: July 2021
Toward a Better Understanding of Bioassays for the Development of Biopharmaceuticals by Exploring the Structure-Antibody-Dependent Cellular Cytotoxicity Relationship in Human Primary Cells
- DOI: 10.3389/fimmu.2020.552596
- OpenAlex ID: https://openalex.org/W3097154512
- Published: October 2020
Performance of Different Diagnostic PD-L1 Clones in Head and Neck Squamous Cell Carcinoma
- DOI: 10.3389/fmed.2021.640515
- OpenAlex ID: https://openalex.org/W3157652933
- Published: April 2021
Human Papillomavirus Infections in Cervical Samples From HIV-Positive Women: Evaluation of the Presence of the Nonavalent HPV Genotypes and Genetic Diversity
- DOI: 10.3389/fmicb.2020.603657
- OpenAlex ID: https://openalex.org/W3108686789
- Published: November 2020
A novel retinal ganglion cell quantification tool based on deep learning
- DOI: 10.1038/s41598-020-80308-y
- OpenAlex ID: https://openalex.org/W3118557864
- Published: January 2021
Predicting the clinical management of skin lesions using deep learning
- DOI: 10.1038/s41598-021-87064-7
- OpenAlex ID: https://openalex.org/W3141661082
- Published: April 2021
Urinary miRNA profiles discriminate between obstruction-induced bladder dysfunction and healthy controls
- DOI: 10.1038/s41598-021-89535-3
- OpenAlex ID: https://openalex.org/W3160735140
- Published: May 2021
Nanoscale slip length prediction with machine learning tools
- DOI: 10.1038/s41598-021-91885-x
- OpenAlex ID: https://openalex.org/W3172499955
- Published: June 2021
Validating quantitative PCR assays for cfDNA detection without DNA extraction in exercising SLE patients
- DOI: 10.1038/s41598-021-92826-4
- OpenAlex ID: https://openalex.org/W3174549692
- Published: June 2021
Synergistic effects of contaminants in Lombardy waters
- DOI: 10.1038/s41598-021-93321-6
- OpenAlex ID: https://openalex.org/W3137290345
- Published: July 2021
Sublinear domination and core–periphery networks
- DOI: 10.1038/s41598-021-94105-8
- OpenAlex ID: https://openalex.org/W3184827511
- Published: July 2021
Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1
- DOI: 10.1038/s41396-019-0430-z
- OpenAlex ID: https://openalex.org/W2944148739
- Published: May 2019
A Biofeedback App for Migraine: Development and Usability Study
- DOI: 10.2196/23229
- OpenAlex ID: https://openalex.org/W3170032457
- Published: July 2021
Teleconsultations between Patients and Healthcare Professionals in Primary Care in Catalonia: The Evaluation of Text Classification Algorithms Using Supervised Machine Learning
- DOI: 10.3390/ijerph17031093
- OpenAlex ID: https://openalex.org/W2994825152
- Published: February 2020
Deep Learning Approach for Imputation of Missing Values in Actigraphy Data: Algorithm Development Study
- DOI: 10.2196/16113
- OpenAlex ID: https://openalex.org/W3027896923
- Published: July 2020
Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila
- DOI: 10.7554/eLife.63856
- OpenAlex ID: https://openalex.org/W3127332899
- Published: February 2021
An image-based data-driven analysis of cellular architecture in a developing tissue
- DOI: 10.7554/eLife.55913
- OpenAlex ID: https://openalex.org/W3033330793
- Published: June 2020
Parallel CRISPR-Cas9 screens clarify impacts of p53 on screen performance
- DOI: 10.7554/eLife.55325
- OpenAlex ID: https://openalex.org/W3027357380
- Published: May 2020
Coherent theta activity in the medial and orbital frontal cortices encodes reward value
- DOI: 10.7554/eLife.63372
- OpenAlex ID: https://openalex.org/W3196692570
- Published: September 2021
Biochemical patterns of antibody polyreactivity revealed through a bioinformatics-based analysis of CDR loops
- DOI: 10.7554/eLife.61393
- OpenAlex ID: https://openalex.org/W3106152681
- Published: November 2020
GitHub Events
Total
- Issues event: 114
- Watch event: 894
- Delete event: 3
- Issue comment event: 175
- Push event: 6
- Pull request review comment event: 18
- Pull request review event: 18
- Pull request event: 51
- Fork event: 114
- Create event: 3
Last Year
- Issues event: 114
- Watch event: 895
- Delete event: 3
- Issue comment event: 175
- Push event: 6
- Pull request review comment event: 18
- Pull request review event: 18
- Pull request event: 51
- Fork event: 114
- Create event: 3
Committers
Last synced: 5 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| mwaskom | m****m@s****u | 2,212 |
| Maoz Gelbart | 1****t | 73 |
| Olga Botvinnik | o****k@g****m | 65 |
| joelostblom | j****m@g****m | 24 |
| Saulius Lukauskas | l****s@g****m | 20 |
| Paul Hobson | p****n@g****m | 20 |
| Drew O'Kane | d****e@c****m | 18 |
| David C. Gemperline | d****e@g****m | 12 |
| Tom Augspurger | t****r@g****m | 9 |
| Yaroslav Halchenko | d****n@o****m | 9 |
| dependabot[bot] | 4****] | 8 |
| John B. Cole | j****e@g****m | 8 |
| JWarmenhoven | j****n@g****m | 8 |
| Michael Waskom | m****m@g****u | 8 |
| Ewout ter Hoeven | E****n@s****l | 7 |
| Julian de Ruiter | j****r@g****m | 6 |
| gkunter | c****y@u****e | 6 |
| Cameron Pye | c****e@g****m | 5 |
| Jake VanderPlas | j****p@g****m | 5 |
| Stephan Hoyer | s****r@c****m | 5 |
| Gravish, Nick | n****h@N****l | 5 |
| Stefanie Molin | 2****n | 4 |
| Yvonne Fröhlich | 9****h | 4 |
| Pete Bachant | p****t@g****m | 4 |
| Marcel Martin | m****n@s****e | 4 |
| Kyle Meyer | k****e@k****m | 4 |
| CorbanSwain | C****n@g****m | 4 |
| Alistair Miles | a****o@g****m | 4 |
| e-q | e****o@g****m | 4 |
| gkunter | g****b@s****e | 4 |
| and 184 more... | ||
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 4 months ago
All Time
- Total issues: 441
- Total pull requests: 243
- Average time to close issues: 3 months
- Average time to close pull requests: 2 months
- Total issue authors: 366
- Total pull request authors: 79
- Average comments per issue: 2.64
- Average comments per pull request: 1.42
- Merged pull requests: 120
- Bot issues: 0
- Bot pull requests: 26
Past Year
- Issues: 77
- Pull requests: 46
- Average time to close issues: 3 days
- Average time to close pull requests: 17 days
- Issue authors: 75
- Pull request authors: 23
- Average comments per issue: 1.01
- Average comments per pull request: 0.74
- Merged pull requests: 9
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- mwaskom (23)
- z626093820 (6)
- frfeng (5)
- jhncls (5)
- pnacht (4)
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- JanPalasek (3)
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- KathSe1984 (2)
- rongcuid (2)
Pull Request Authors
- mwaskom (73)
- dependabot[bot] (26)
- MaozGelbart (9)
- pnacht (5)
- MarcoGorelli (5)
- yvonnefroehlich (4)
- aydinomer00 (4)
- jorisvandenbossche (3)
- leoluecken (3)
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- beyarkay (3)
- poorvaja-s-hub (2)
- janikkokot (2)
- eloyvallinaes (2)
Top Labels
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Packages
- Total packages: 18
-
Total downloads:
- pypi 27,940,660 last-month
- Total docker downloads: 360,058,992
-
Total dependent packages: 3,897
(may contain duplicates) -
Total dependent repositories: 74,152
(may contain duplicates) - Total versions: 114
- Total maintainers: 3
pypi.org: seaborn
Statistical data visualization
- Documentation: https://seaborn.readthedocs.io/
- License: BSD License
-
Latest release: 0.13.2
published almost 2 years ago
Rankings
Maintainers (1)
alpine-v3.18: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.12.2-r1
published over 2 years ago
Rankings
Maintainers (1)
alpine-v3.18: py3-seaborn-pyc
Precompiled Python bytecode for py3-seaborn
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.12.2-r1
published over 2 years ago
Rankings
Maintainers (1)
alpine-edge: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r2
published about 1 year ago
Rankings
Maintainers (1)
conda-forge.org: seaborn
Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing attractive statistical graphics.
- Homepage: https://seaborn.pydata.org
- License: BSD-3-Clause
-
Latest release: 0.12.1
published about 3 years ago
Rankings
proxy.golang.org: github.com/mwaskom/seaborn
- Documentation: https://pkg.go.dev/github.com/mwaskom/seaborn#section-documentation
- License: bsd-3-clause
-
Latest release: v0.13.2
published almost 2 years ago
Rankings
alpine-edge: py3-seaborn-pyc
Precompiled Python bytecode for py3-seaborn
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r2
published about 1 year ago
Rankings
Maintainers (1)
conda-forge.org: seaborn-base
Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing attractive statistical graphics.
- Homepage: https://seaborn.pydata.org
- License: BSD-3-Clause
-
Latest release: 0.12.1
published about 3 years ago
Rankings
anaconda.org: seaborn
Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing attractive statistical graphics.
- Homepage: https://seaborn.pydata.org
- License: BSD-3-Clause
-
Latest release: 0.13.2
published over 1 year ago
Rankings
alpine-v3.17: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.12.1-r0
published about 3 years ago
Rankings
Maintainers (1)
alpine-v3.21: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r2
published about 1 year ago
Rankings
Maintainers (1)
alpine-v3.20: py3-seaborn-pyc
Precompiled Python bytecode for py3-seaborn
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r1
published over 1 year ago
Rankings
Maintainers (1)
alpine-v3.19: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.0-r0
published about 2 years ago
alpine-v3.22: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r2
published about 1 year ago
Rankings
Maintainers (1)
alpine-v3.22: py3-seaborn-pyc
Precompiled Python bytecode for py3-seaborn
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r2
published about 1 year ago
Rankings
Maintainers (1)
alpine-v3.20: py3-seaborn
Statistical data visualization in Python
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r1
published over 1 year ago
Rankings
Maintainers (1)
alpine-v3.19: py3-seaborn-pyc
Precompiled Python bytecode for py3-seaborn
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.0-r0
published about 2 years ago
Rankings
Maintainers (1)
alpine-v3.21: py3-seaborn-pyc
Precompiled Python bytecode for py3-seaborn
- Homepage: https://github.com/mwaskom/seaborn
- License: BSD-3-Clause
-
Latest release: 0.13.2-r2
published about 1 year ago
Rankings
Maintainers (1)
Dependencies
- actions/checkout v3 composite
- actions/checkout v2 composite
- actions/setup-python v4 composite
- codecov/codecov-action v3 composite
- matplotlib >=3.4,!=3.6.1
- numpy >=1.20,!=1.24.0
- pandas >=1.2
