https://github.com/csoneson/tabulamurisdata
Access data from Tabula Muris Consortium via R/Bioconductor
Science Score: 46.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 1 DOI reference(s) in README -
✓Academic publication links
Links to: nature.com -
✓Committers with academic emails
1 of 6 committers (16.7%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.0%) to scientific vocabulary
Keywords from Contributors
bioconductor-package
gene
transcriptomics
immune-repertoire
single-cell-rna-seq
bioconductor
core-package
u24ca289073
bioinformatics
rna-seq
Last synced: 7 months ago
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JSON representation
Repository
Access data from Tabula Muris Consortium via R/Bioconductor
Basic Info
Statistics
- Stars: 2
- Watchers: 3
- Forks: 3
- Open Issues: 0
- Releases: 0
Created over 7 years ago
· Last pushed over 1 year ago
Metadata Files
Readme
Changelog
License
README.md
Tabula Muris data
R/ExperimentHub package for accessing data from the Tabula Muris Consortium as SingleCellExperiment objects.
If you use the data, please cite the original publication:
- The Tabula Muris Consortium: Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature doi:10.1038/s41586-018-0590-4 (2018).
Processed data files and metadata were downloaded from the links provided in this GitHub repository on August 26, 2018:
Owner
- Name: Charlotte Soneson
- Login: csoneson
- Kind: user
- Website: http://csoneson.github.io/
- Twitter: CSoneson
- Repositories: 110
- Profile: https://github.com/csoneson
GitHub Events
Total
- Push event: 5
- Create event: 1
Last Year
- Push event: 5
- Create event: 1
Committers
Last synced: over 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Charlotte Soneson | c****n@g****m | 52 |
| Hervé Pagès | h****b@g****m | 18 |
| J Wokaty | j****y | 4 |
| nturaga | n****a@g****m | 2 |
| lshep | l****d@r****g | 2 |
| Federico Marini | m****f@u****e | 1 |
Committer Domains (Top 20 + Academic)
uni-mainz.de: 1
roswellpark.org: 1
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 1
- Total pull requests: 1
- Average time to close issues: about 1 hour
- Average time to close pull requests: 3 minutes
- Total issue authors: 1
- Total pull request authors: 1
- Average comments per issue: 1.0
- Average comments per pull request: 1.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- vjcitn (1)
Pull Request Authors
- federicomarini (1)