https://github.com/csoneson/duoclustering2018

R package with data sets and clustering results from Duò et al (F1000Research 2018)

https://github.com/csoneson/duoclustering2018

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
    Found 2 DOI reference(s) in README
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (3.0%) to scientific vocabulary

Keywords from Contributors

bioconductor-package transcriptome gene genomics integrative biology sequences statistical-analysis outlier-detection rna-seq
Last synced: 11 months ago · JSON representation

Repository

R package with data sets and clustering results from Duò et al (F1000Research 2018)

Basic Info
Statistics
  • Stars: 3
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created about 8 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog

README.md

DuoClustering2018

R package with data sets and clustering results from Duò et al (F1000Research 2018). See https://doi.org/10.12688/F1000RESEARCH.15666.1 for the paper. The package is available from https://bioconductor.org/packages/DuoClustering2018. To install the package use the following commands in R: if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("DuoClustering2018", version = "devel")

Owner

  • Name: Charlotte Soneson
  • Login: csoneson
  • Kind: user

GitHub Events

Total
  • Push event: 2
Last Year
  • Push event: 2

Committers

Last synced: over 1 year ago

All Time
  • Total Commits: 110
  • Total Committers: 4
  • Avg Commits per committer: 27.5
  • Development Distribution Score (DDS): 0.327
Past Year
  • Commits: 4
  • Committers: 1
  • Avg Commits per committer: 4.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Charlotte Soneson c****n@g****m 74
aduo a****o@b****h 28
Hervé Pagès h****s@f****g 6
nturaga n****a@g****m 2
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 0
  • Total pull requests: 2
  • Average time to close issues: N/A
  • Average time to close pull requests: 19 days
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 1.0
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
  • csoneson (2)
Top Labels
Issue Labels
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Dependencies

DESCRIPTION cran
  • ExperimentHub * imports
  • dplyr * imports
  • ggplot2 * imports
  • ggthemes * imports
  • magrittr * imports
  • mclust * imports
  • methods * imports
  • purrr * imports
  • reshape2 * imports
  • stats * imports
  • tidyr * imports
  • utils * imports
  • viridis * imports
  • BiocStyle * suggests
  • SingleCellExperiment * suggests
  • SummarizedExperiment * suggests
  • iSEE * suggests
  • knitr * suggests
  • plyr * suggests
  • rmarkdown * suggests
  • scater * suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/cache v1 composite
  • actions/checkout v2 composite
  • actions/upload-artifact master composite
  • grimbough/bioc-actions/build-install-check v1 composite
  • grimbough/bioc-actions/run-BiocCheck v1 composite
  • grimbough/bioc-actions/setup-bioc v1 composite
  • r-lib/actions/setup-pandoc v2 composite