https://github.com/cthoyt/rorio
Convert the Research Organization Registry (ROR) into an OWL instance ontology
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.9%) to scientific vocabulary
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Repository
Convert the Research Organization Registry (ROR) into an OWL instance ontology
Basic Info
Statistics
- Stars: 2
- Watchers: 3
- Forks: 0
- Open Issues: 1
- Releases: 0
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Metadata Files
README.md
ROR in OWL
Similar to the ORCIDIO, which makes an ontology of instances of researchers via ORCID, this repository houses a script to convert the Research Organization Registry (ROR) into an ontology of instances of organizations.
The latest version can be downloaded with the following:
| Format | PURL | |----------------|-----------------------------------| | OWL RDF/XML | https://w3id.org/rorio/rorio.owl | | OBO Flat File | https://w3id.org/rorio/rorio.obo | | OBO Graph JSON | https://w3id.org/rorio/rorio.json |
In the screenshot, you can see the part of, has part, and located in relations for the example organization. Unfortunately, Protégé does not have support for navigating partonomies on individuals.
Build
Install the requirements and run with:
shell
python -m pip install -r requirements.txt
python build.py
Named Entity Recognition
A Gilda index is generated for usage in named entity recognition (NER) and named entity normalization (NEN; i.e., grounding). It is available at https://w3id.org/rorio/rorio.gilda.tsv.gz. It can be used like in:
```python from urllib.request import urlretrieve from gilda import Grounder
url = "https://w3id.org/rorio/rorio.gilda.tsv.gz" path = "rorio.gilda.tsv.gz" urlretrieve(url, path)
grounder = Grounder(path) scored_matches = grounder.ground("Rheinische Friedrich-Wilhelms-Universität Bonn") ```
License
The data downloaded from https://doi.org/10.5281/zenodo.6347574 are licensed under CC0. So is this repo. This is additionally self-documented in the ontology files.
Owner
- Name: Charles Tapley Hoyt
- Login: cthoyt
- Kind: user
- Location: Bonn, Germany
- Company: RWTH Aachen University
- Website: https://cthoyt.com
- Repositories: 489
- Profile: https://github.com/cthoyt
GitHub Events
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Last Year
Committers
Last synced: 11 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| github-actions | 4****] | 29 |
| Charles Tapley Hoyt | c****t@g****m | 24 |
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 0
- Total pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
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- cthoyt (2)
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Dependencies
- EndBug/add-and-commit v9 composite
- actions/checkout v2 composite
- bioregistry *
- click *
- funowl *
- rdflib *
- tqdm *
- zenodo_client *