Parent-map
Parent-map: analysis of parental contributions to evolved or engineered protein or DNA sequences - Published in JOSS (2021)
Science Score: 93.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 5 DOI reference(s) in README and JOSS metadata -
✓Academic publication links
Links to: joss.theoj.org -
○Committers with academic emails
-
○Institutional organization owner
-
✓JOSS paper metadata
Published in Journal of Open Source Software
Repository
Analyze parental contributions to evolved or engineered protein or DNA sequences
Basic Info
- Host: GitHub
- Owner: damienmarsic
- License: gpl-3.0
- Language: HTML
- Default Branch: master
- Size: 1.07 MB
Statistics
- Stars: 2
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 2
Metadata Files
README.md
Parent-map
Analyze parental contributions to evolved or engineered protein or DNA sequences
Run parent-map without arguments to start in GUI mode. Run parent-map with arguments to start in console mode. Run parent-map.py -h for help and list of arguments.
Install from Bioconda:
conda install -c bioconda parent-map
Install from PyPI:
pip install parent-map
Note that you may need to individually install some dependencies. If you get an error message about missing modules when trying to run parent-map after installing it with pip, install them using pip install. Example: pip install gooey
Run:
python -m parent-map
Windows installer: https://sourceforge.net/projects/parent-map/
Full documentation: https://parent-map.readthedocs.io/
GitHub issues (bug reports, feature requests): https://github.com/damienmarsic/Parent-map/issues/new/choose
JOSS Publication
Parent-map: analysis of parental contributions to evolved or engineered protein or DNA sequences
Authors
Porton Biologics, 388 Xinping Street, Suzhou Industrial Park, Jiangsu 215021, China
Editor
Charlotte Soneson
Tags
Directed evolution AAV Sequence analysisGitHub Events
Total
Last Year
Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Damien Marsic | d****c@g****m | 39 |
| Damien Marsic(Portonbio) | D****c@p****m | 17 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 2
- Total pull requests: 0
- Average time to close issues: about 15 hours
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 2.5
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- j-andrews7 (2)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 24 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 8
- Total maintainers: 1
pypi.org: parent-map
Analyze parental contributions to evolved or engineered protein or DNA sequences
- Homepage: https://github.com/damienmarsic/parent-map
- Documentation: https://parent-map.readthedocs.io/
- License: GNU General Public License v3 (GPLv3)
-
Latest release: 1.1.2
published about 5 years ago