triton

:whale: Scripps Whale Acoustics Lab :earth_americas: Scripps Acoustic Ecology Lab - Triton with remoras in development

https://github.com/marinebioacousticsrc/triton

Science Score: 62.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    8 of 16 committers (50.0%) from academic institutions
  • Institutional organization owner
    Organization marinebioacousticsrc has institutional domain (acoustics.ucsd.edu)
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (9.0%) to scientific vocabulary

Keywords

acoustics audio-processing classification detection machine-learning marine-species mbarc scripps sound triton whale
Last synced: 4 months ago · JSON representation ·

Repository

:whale: Scripps Whale Acoustics Lab :earth_americas: Scripps Acoustic Ecology Lab - Triton with remoras in development

Basic Info
  • Host: GitHub
  • Owner: MarineBioAcousticsRC
  • License: other
  • Language: MATLAB
  • Default Branch: master
  • Homepage:
  • Size: 47.9 MB
Statistics
  • Stars: 51
  • Watchers: 28
  • Forks: 29
  • Open Issues: 27
  • Releases: 4
Topics
acoustics audio-processing classification detection machine-learning marine-species mbarc scripps sound triton whale
Created almost 7 years ago · Last pushed 5 months ago
Metadata Files
Readme License Citation

README.md

Triton

The Triton Software Package is aimed at evaluating long duration, continuous and scheduled duty-cycle time series.

The Triton base package was developed by Dr. Sean M. Wiggins at Scripps Institution of Oceanography, UC San Diego.

Remoras are developed by contributors at Scripps Institution of Oceanography and San Diego State University.

For instructions, please check out our wiki.

If you do not have a Matlab installation, please check out out our standalone version.

Requirements: Triton requires Matlab's signal processing toolbox. Other Remoras may require additional toolboxes.

Non-GitHub Users: You can obtain all of the source code by clicking the green "code" button and selecting "Download ZIP". However we encourage you to clone the repository so that you can easily recieve updates and bug fixes.

Current and past funders include:
- NOAA Protected Species Toolbox Initiative
- NAVFAC Living Marine Resources Program

Batch/MultiDir LTSA Remora development TO DOs

  • add gui/step to check output filenames and change if wanted
  • test Remora folder alone with flac version

Owner

  • Name: Marine Bioacoustics Research Collaborative
  • Login: MarineBioAcousticsRC
  • Kind: organization

Our mission is to advance the study of marine animal population abundance, seasonality and behavior using acoustic techniques.

Citation (CITATION.cff)

# This CITATION.cff file has the citation format for Triton Software with Remoras under developement.
# Please check the reference section below for each Remoras detailed information.

cff-version: 1.0.2
message: "If you use Triton Software, please cite it using the following metadata"
title: "Triton Software Package"
authors:
- alias: MBARC
  name: "Marine BioAcoustics Research Collaborative"
version: 1.0.2
year: 2024
repository-code: "https://github.com/MarineBioAcousticsRC/Triton"
license: "This software is Copyright (c) 2019, The Regents of the University of California. All rights reserved."
identifiers:
  - description: This is the collection of code archived of a snapshot of Triton and Remoras in 2024
    type: doi
    value: 10.5281/zenodo.10963175
  - description: This is the collection of code archived of a snapshot of Triton and Remoras in 2021
    type: doi
    value: 10.5281/zenodo.1234
references:
- type: software
  title: "Ship-Detector Remora"
  authors:
      - family-names: Solsona-Berga
        given-names: Alba
  message: "Cite the following article to reference the concepts of this Remora described in the supplementary material"
  doi: 10.1371/journal.pcbi.1007598
- type: software
  title: "SPICE-Detector Remora"
  authors:
      - family-names: Frasier
        given-names: Kait
      - family-names: Ziegenhorn
        given-names: Morgan
      - family-names: Solsona-Berga
        given-names: Alba
  message: "Cite the following article to reference the concepts of this Remora"
  doi: 10.1371/journal.pcbi.1009613
- type: software
  title: "ClusterTool Remora"
  authors:
      - family-names: Frasier
        given-names: Kait
      - family-names: Ziegenhorn
        given-names: Morgan
      - family-names: Solsona-Berga
        given-names: Alba
  message: "Cite the following article to reference the concepts of this Remora"
  doi: 10.1371/journal.pcbi.1009613
- type: software
  title: "NNet Remora"
  authors:
      - family-names: Frasier
        given-names: Kait
      - family-names: Rafter
        given-names: Macey
      - family-names: Solsona-Berga
        given-names: Alba
  message: "Cite the following article to reference the concepts of this Remora"
  doi: 10.1371/journal.pcbi.1009613
- type: software
  title: "Soundscape-Metrics Remora"
  authors:
      - family-names: Baumann-Pickering
        given-names: Simone
      - family-names: Schoenbeck
        given-names: Clara
  message: "Cite the following link to reference the concepts of this Remora"
  url: https://sanctuaries.noaa.gov/science/monitoring/sound
  


GitHub Events

Total
  • Issues event: 5
  • Watch event: 12
  • Member event: 2
  • Issue comment event: 15
  • Push event: 35
  • Gollum event: 15
  • Pull request event: 5
  • Fork event: 4
Last Year
  • Issues event: 5
  • Watch event: 12
  • Member event: 2
  • Issue comment event: 15
  • Push event: 35
  • Gollum event: 15
  • Pull request event: 5
  • Fork event: 4

Committers

Last synced: over 1 year ago

All Time
  • Total Commits: 527
  • Total Committers: 16
  • Avg Commits per committer: 32.938
  • Development Distribution Score (DDS): 0.757
Past Year
  • Commits: 15
  • Committers: 3
  • Avg Commits per committer: 5.0
  • Development Distribution Score (DDS): 0.333
Top Committers
Name Email Commits
sfregosi 2****i 128
kfrasier k****r@g****m 100
MZiegenhorn 4****n 80
akok a****k@u****u 46
Alba Solsona a****b@g****m 36
Alba Solsona a****a@u****u 34
Kait Frasier k****r 29
sbaumannpickering 3****g 28
Marie m****h@s****u 20
Kait Frasier k****r@u****u 8
fascimare a****k@b****l 8
Macey Rafter 3****r 5
John Hildebrand j****d@u****u 2
Macey Rafter m****r@u****u 1
Macey Rafter m****r@u****u 1
CSchoenbeck 1****k 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 25
  • Total pull requests: 80
  • Average time to close issues: 9 months
  • Average time to close pull requests: about 1 month
  • Total issue authors: 14
  • Total pull request authors: 12
  • Average comments per issue: 1.76
  • Average comments per pull request: 0.63
  • Merged pull requests: 65
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 7
  • Pull requests: 5
  • Average time to close issues: about 8 hours
  • Average time to close pull requests: 5 minutes
  • Issue authors: 5
  • Pull request authors: 5
  • Average comments per issue: 1.71
  • Average comments per pull request: 0.0
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • kmerkens (5)
  • kfrasier (4)
  • chuetz (3)
  • laralps (2)
  • sfregosi (2)
  • Mike-J-Adams (1)
  • ctribss (1)
  • edenzang (1)
  • Gbellport (1)
  • skraftarcher (1)
  • Lysslopez (1)
  • chandragaja (1)
  • jstanley4 (1)
  • nposdalj (1)
  • m1alksne (1)
Pull Request Authors
  • fascimare (19)
  • MZiegenhorn (17)
  • asolsonaberga (16)
  • sfregosi (14)
  • kfrasier (12)
  • CSchoenbeck (3)
  • MaceyRafter (3)
  • lhbalitaan (1)
  • Arwingg (1)
  • rcohen85 (1)
  • margolinat (1)
  • jahildebrand (1)
  • selenefregosi-noaa (1)
Top Labels
Issue Labels
Detector Remora (1)
Pull Request Labels
Detector Remora (3) bug (2) enhancement (1)