https://github.com/cwwhitney/edible_plants_bayesian-hierarchical-modeling
Bayesian hierarchical modeling to determine total edible plants
https://github.com/cwwhitney/edible_plants_bayesian-hierarchical-modeling
Science Score: 26.0%
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○Scientific vocabulary similarity
Low similarity (4.5%) to scientific vocabulary
Last synced: 6 months ago
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Repository
Bayesian hierarchical modeling to determine total edible plants
Basic Info
- Host: GitHub
- Owner: CWWhitney
- License: gpl-3.0
- Language: HTML
- Default Branch: main
- Homepage: https://htmlpreview.github.io/?https://github.com/CWWhitney/edible_plants_Bayesian-hierarchical-modeling/blob/main/index.html
- Size: 1.38 MB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 1
- Releases: 0
Created about 1 year ago
· Last pushed 12 months ago
Metadata Files
Readme
License
README.md
edibleplantsBayesian-hierarchical-modeling
Overview
Estimate the proportion and total number of edible vascular plant species using Bayesian hierarchical modeling.
Method
- Simulate Data: Generate species data with edibility factors.
- Fit Model: Use
brmsfor Bayesian logistic regression. - Posterior Inference: Estimate the percentage and number of edible plants.
- Model Validation: Run predictive checks to assess model fit.
Usage
- Install required packages:
r install.packages(c("tidyverse", "brms", "bayesplot", "HDInterval", "bookdown")) - Run
Index.Rmdto execute the analysis. - Review output for estimated edible species and model diagnostics.
Contact
Cory Whitney - cory.whitney@uni-bonn.de
Owner
- Name: Cory Whitney
- Login: CWWhitney
- Kind: user
- Location: Bonn, Germany
- Company: University of Bonn
- Website: https://www.zef.de/index.php?id=2232&tx_zefportal_staff[ref]=2252&tx_zefportal_staff[uid]=1799&no_cache=1
- Twitter: human_ecologist
- Repositories: 42
- Profile: https://github.com/CWWhitney
Holistic and collaborative research processes related to decision theory, human ecology, ethno- botany/biology/ecology.
GitHub Events
Total
- Issues event: 1
- Delete event: 1
- Push event: 5
- Pull request event: 2
- Create event: 3
Last Year
- Issues event: 1
- Delete event: 1
- Push event: 5
- Pull request event: 2
- Create event: 3
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 1
- Total pull requests: 2
- Average time to close issues: N/A
- Average time to close pull requests: less than a minute
- Total issue authors: 1
- Total pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 2
- Average time to close issues: N/A
- Average time to close pull requests: less than a minute
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- CWWhitney (1)
Pull Request Authors
- CWWhitney (2)
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