https://github.com/cyclotronresearchcentre/netstats
This repo contains R code to plot the outputs of the nipype connectivity pipelines
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 1 DOI reference(s) in README -
○Academic publication links
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.9%) to scientific vocabulary
Repository
This repo contains R code to plot the outputs of the nipype connectivity pipelines
Basic Info
- Host: GitHub
- Owner: CyclotronResearchCentre
- Language: R
- Default Branch: master
- Size: 1.41 MB
Statistics
- Stars: 1
- Watchers: 3
- Forks: 1
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
network-statplots
This repository contains some simple R and ggplot2 (http://ggplot2.org/) functions to plot the outputs of the Nipype connectivity pipelines (e.g. http://nipy.sourceforge.net/nipype/users/examples/dmriconnectivityadvanced.html).
These functions were written for the following paper (please cite it and ggplot2 if you use or modify them):
Ziegler E, Foret A, Mascetti L, Muto V, Le Bourdiec-Shaffii A, et al. (2013) Altered White Matter Architecture in BDNF Met Carriers. PLoS ONE 8(7): e69290. doi: 10.1371/journal.pone.0069290
Available at http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0069290
Some examples
Number of fibers per connectome by subject and group
https://www.dropbox.com/s/cbfd3ruc7xbvt4z/Screenshot%202014-04-29%2014.34.59.png
Number of fibers per group
https://www.dropbox.com/s/3z1uwo4isdlrw4g/Screenshot%202014-04-29%2014.36.44.png
Histograms by metrics per group (with t-testing)
https://www.dropbox.com/s/afq6iebqziolh4t/Screenshot%202014-04-29%2014.45.06.png https://www.dropbox.com/s/9joxojl93rwidco/Screenshot%202014-04-29%2014.45.59.png https://www.dropbox.com/s/xqhfop12zdp3q6k/Screenshot%202014-04-29%2014.46.51.png
Owner
- Name: Cyclotron Research Centre
- Login: CyclotronResearchCentre
- Kind: organization
- Email: c.phillips@uliege.be
- Location: University of Liège, Belgium
- Website: https://www.gigacrc.uliege.be/
- Twitter: Giga_CRCivi
- Repositories: 70
- Profile: https://github.com/CyclotronResearchCentre
In vivo imaging with positron emission tomography and magnetic resonance imaging as well as electrophysiology