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Open Source Science

https://github.com/cytomining/cytotable-benchmarks

Benchmarks for CytoTable and related.

https://github.com/cytomining/cytotable-benchmarks

Science Score: 33.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 1 committers (100.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.6%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Benchmarks for CytoTable and related.

Basic Info
  • Host: GitHub
  • Owner: cytomining
  • License: bsd-3-clause
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 7.85 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 1
  • Open Issues: 2
  • Releases: 0
Created about 3 years ago · Last pushed about 1 year ago
Metadata Files
Readme License

README.md

🛠️ CytoTable benchmarks

DOI

A repository for analyzing various benchmarks related to CytoTable.

Installation

Please use Python poetry to run and install related content.

```bash

after installing poetry, create the environment

poetry install ```

Development

Please follow installation steps above and then use a relevant Jupyter environment to open and explore the notebooks under the notebooks directory.

```bash

after creating poetry environment, run jupyter

poetry run jupyter lab ```

Owner

  • Name: cytomining
  • Login: cytomining
  • Kind: organization

GitHub Events

Total
  • Create event: 1
  • Release event: 1
  • Issues event: 7
  • Issue comment event: 9
  • Push event: 3
  • Pull request review comment event: 6
  • Pull request review event: 9
  • Pull request event: 6
Last Year
  • Create event: 1
  • Release event: 1
  • Issues event: 7
  • Issue comment event: 9
  • Push event: 3
  • Pull request review comment event: 6
  • Pull request review event: 9
  • Pull request event: 6

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 24
  • Total Committers: 1
  • Avg Commits per committer: 24.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 3
  • Committers: 1
  • Avg Commits per committer: 3.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
d33bs d****n@c****u 24
Committer Domains (Top 20 + Academic)
cuanschutz.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 3
  • Total pull requests: 12
  • Average time to close issues: almost 2 years
  • Average time to close pull requests: 13 days
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 0.33
  • Average comments per pull request: 0.92
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 2
  • Pull requests: 7
  • Average time to close issues: N/A
  • Average time to close pull requests: 1 day
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.86
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • d33bs (3)
Pull Request Authors
  • d33bs (12)
Top Labels
Issue Labels
enhancement (2)
Pull Request Labels

Dependencies

.github/workflows/arrow-benchmarks.yml actions
  • actions/checkout v3 composite
  • actions/setup-python v4 composite
poetry.lock pypi
  • 183 dependencies
pyproject.toml pypi