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Open Source Science

https://github.com/cytoscape/gsoc2021-enrichment-tool

code repo for GSoC 2021 Enrichment Tool project

https://github.com/cytoscape/gsoc2021-enrichment-tool

Science Score: 10.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 2 committers (50.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (7.0%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

code repo for GSoC 2021 Enrichment Tool project

Basic Info
  • Host: GitHub
  • Owner: cytoscape
  • License: lgpl-2.1
  • Language: Java
  • Default Branch: main
  • Size: 91.8 KB
Statistics
  • Stars: 0
  • Watchers: 19
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created about 5 years ago · Last pushed about 5 years ago
Metadata Files
Readme License

README.md

gsoc2021-enrichment-tool

code repo for GSoC 2021 Enrichment Tool project

Instruction to make the app executable

Pre- Requisites

Java Maven Cytoscape

Step 1

Clone this repository into the local desktop. Navigate to the directory using cmd or open Git Bash in the mentioned directory.

Run the following commands

mvn clean mvn compile mvn clean install A Build Success will be shown in the cmd and a jar file will be created in /target folder of the current directory.

Step 2

1.Copy the App from the <b>/target</b> folder into "C:\Users\<your PC_NAME>\CytoscapeConfiguration\3\apps\installed". 2. Open the Cytoscape app and click on <b>Apps</b> from the menu bar and It will look similar to the following images. Click on the "Samples" from the list and the app will be listed there.

Owner

  • Name: Cytoscape Consortium
  • Login: cytoscape
  • Kind: organization

GitHub Events

Total
Last Year

Committers

Last synced: 10 months ago

All Time
  • Total Commits: 6
  • Total Committers: 2
  • Avg Commits per committer: 3.0
  • Development Distribution Score (DDS): 0.167
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Indraneel Ghosh i****8@g****m 5
Alexander Pico a****o@g****u 1
Committer Domains (Top 20 + Academic)
gladstone.ucsf.edu: 1

Issues and Pull Requests

Last synced: 10 months ago

Dependencies

pom.xml maven
  • org.ops4j.pax.logging:pax-logging-api 1.5.3 provided
  • org.ops4j.pax.logging:pax-logging-service 1.5.3 provided
  • colt:colt 1.0.3
  • com.googlecode.json-simple:json-simple 1.1.1
  • concurrent:concurrent 1.3.3
  • org.apache.httpcomponents:httpclient 4.5
  • org.cytoscape:service-api 3.4.0
  • org.cytoscape:swing-app-api 3.4.0
  • org.cytoscape:swing-application-api 3.4.0
  • org.cytoscape:work-api 3.4.0
  • org.osgi:org.osgi.core 4.2.0
  • junit:junit 4.8.2 test
  • org.cytoscape:service-api 3.4.0 test
  • org.mockito:mockito-all 1.8.5 test