Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
2 of 7 committers (28.6%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.8%) to scientific vocabulary
Keywords
Repository
Identifier mapping
Basic Info
- Host: GitHub
- Owner: cytoscape
- Language: Java
- Default Branch: master
- Size: 1.95 MB
Statistics
- Stars: 2
- Watchers: 19
- Forks: 1
- Open Issues: 4
- Releases: 0
Topics
Metadata Files
README.md
idmapper
BridgeDB based Identifier mapping
Version 3.6.5 - remove KEGG from MappingSource
Version 3.6.4 - added https support
This is a Cytoscape app that allows identifier mapping on tables. Once this app is installed, the table browser will respond to a right click on the column header with a pop-up menu containing the item Map Column...
A dialog is shown to gather the information about the species, and which columns you want to map From (the source) and To (the target). By default, multiple return values will be simplified to the first in the list, but turning off the Force Single checkbox will maintain all returned IDs.
Once the dialog is confirmed, a new column will be added to the Node Table containing the mapped identifiers.
This version adds support for the command dialog and CyREST access.
'{
"columnName": "name",
"forceSingle": "true",
"mapFrom": "HGNC",
"mapTo": "Ensembl",
"network": "A",
"table": "default node",
"species": "Human (Homo sapiens)"
}'
Owner
- Name: Cytoscape Consortium
- Login: cytoscape
- Kind: organization
- Website: http://www.cytoscape.org/
- Repositories: 153
- Profile: https://github.com/cytoscape
GitHub Events
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Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Adam Treister | a****r@g****u | 39 |
| Adam Treister | a****r@g****m | 36 |
| cmzmasek | c****k@y****m | 13 |
| Keiichiro Ono | k****o@g****m | 5 |
| D | d****v@g****m | 4 |
| Christian Zmasek | c****k | 3 |
| Alexander Pico | a****o@g****u | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago