Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/cytoscape/cytoscape-api

Cytoscape 3 API bundles.

https://github.com/cytoscape/cytoscape-api

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    7 of 36 committers (19.4%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (1.5%) to scientific vocabulary

Keywords from Contributors

identifier-mapping cytoscape archival workflow-automation projection bioinformatics systems-biology py2cytoscape cytoscape-interfaces genomics
Last synced: 11 months ago · JSON representation

Repository

Cytoscape 3 API bundles.

Basic Info
  • Host: GitHub
  • Owner: cytoscape
  • License: lgpl-2.1
  • Language: Java
  • Default Branch: develop
  • Size: 6.82 MB
Statistics
  • Stars: 24
  • Watchers: 23
  • Forks: 33
  • Open Issues: 0
  • Releases: 0
Created over 13 years ago · Last pushed over 1 year ago
Metadata Files
Readme License

README.md

Cytoscape 3 API

Build Status

What's This?

This is the parent project of Cytoscape 3 API bundles. These bundles define the Cytoscape 3 public API.

Owner

  • Name: Cytoscape Consortium
  • Login: cytoscape
  • Kind: organization

GitHub Events

Total
  • Push event: 2
  • Pull request review event: 2
  • Pull request event: 1
  • Fork event: 1
  • Create event: 1
Last Year
  • Push event: 2
  • Pull request review event: 2
  • Pull request event: 1
  • Fork event: 1
  • Create event: 1

Committers

Last synced: 12 months ago

All Time
  • Total Commits: 1,458
  • Total Committers: 36
  • Avg Commits per committer: 40.5
  • Development Distribution Score (DDS): 0.848
Past Year
  • Commits: 1
  • Committers: 1
  • Avg Commits per committer: 1.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
mes m****s@0****5 221
Christian Lopes c****s@g****m 184
Mike Kucera m****a@g****m 181
kono k****o@0****5 174
Scooter Morris s****r@c****u 101
mkirby m****y@0****5 88
D d****v@g****m 72
jm jm@0****5 60
pwang p****g@0****5 58
rozagh r****h@0****5 44
clopes c****s@0****5 39
scooter s****r@0****5 35
Jason Montojo j****z@g****m 30
Samad Lotia s****a@g****u 28
Tim Hull t****l@u****u 25
slotia s****a@0****5 23
Keiichiro Ono k****o@g****m 19
Oriol Guitart o****t@p****r 11
Adam Treister a****r@g****u 10
Adam Treister a****r@g****m 8
rodche r****e@0****5 7
thully t****y@0****5 7
Brett Settle b****e@g****m 5
Barry Demchak i****k@g****m 4
ruschein r****n@0****5 4
apico a****o@0****5 3
dtegunov t****v@g****m 3
David d****r@g****m 3
cmzmasek c****k@y****m 2
rodche r****e@g****m 2
and 6 more...
Committer Domains (Top 20 + Academic)
gladstone.ucsf.edu: 4 acm.org: 1 pasteur.fr: 1 ucsd.edu: 1 cgl.ucsf.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 0
  • Total pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • joriki (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

api-bundle/pom.xml maven
  • org.cytoscape:app-api 3.10.0-SNAPSHOT
  • org.cytoscape:application-api 3.10.0-SNAPSHOT
  • org.cytoscape:ci-api 3.10.0-SNAPSHOT
  • org.cytoscape:command-executor-api 3.10.0-SNAPSHOT
  • org.cytoscape:core-task-api 3.10.0-SNAPSHOT
  • org.cytoscape:datasource-api 3.10.0-SNAPSHOT
  • org.cytoscape:equations-api 3.10.0-SNAPSHOT
  • org.cytoscape:event-api 3.10.0-SNAPSHOT
  • org.cytoscape:filter-api 3.10.0-SNAPSHOT
  • org.cytoscape:group-api 3.10.0-SNAPSHOT
  • org.cytoscape:io-api 3.10.0-SNAPSHOT
  • org.cytoscape:jobs-api 3.10.0-SNAPSHOT
  • org.cytoscape:layout-api 3.10.0-SNAPSHOT
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:presentation-api 3.10.0-SNAPSHOT
  • org.cytoscape:property-api 3.10.0-SNAPSHOT
  • org.cytoscape:service-api 3.10.0-SNAPSHOT
  • org.cytoscape:session-api 3.10.0-SNAPSHOT
  • org.cytoscape:swing-app-api 3.10.0-SNAPSHOT
  • org.cytoscape:swing-application-api 3.10.0-SNAPSHOT
  • org.cytoscape:swing-util-api 3.10.0-SNAPSHOT
  • org.cytoscape:util-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • org.cytoscape:vizmap-api 3.10.0-SNAPSHOT
  • org.cytoscape:vizmap-gui-api 3.10.0-SNAPSHOT
  • org.cytoscape:webservice-api 3.10.0-SNAPSHOT
  • org.cytoscape:webservice-swing-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-swing-api 3.10.0-SNAPSHOT
app-api/pom.xml maven
  • org.cytoscape:application-api 3.10.0-SNAPSHOT
  • org.cytoscape:command-executor-api 3.10.0-SNAPSHOT
  • org.cytoscape:core-task-api 3.10.0-SNAPSHOT
  • org.cytoscape:datasource-api 3.10.0-SNAPSHOT
  • org.cytoscape:equations-api 3.10.0-SNAPSHOT
  • org.cytoscape:filter-api 3.10.0-SNAPSHOT
  • org.cytoscape:group-api 3.10.0-SNAPSHOT
  • org.cytoscape:io-api 3.10.0-SNAPSHOT
  • org.cytoscape:jobs-api 3.10.0-SNAPSHOT
  • org.cytoscape:layout-api 3.10.0-SNAPSHOT
  • org.cytoscape:property-api 3.10.0-SNAPSHOT
  • org.cytoscape:service-api 3.10.0-SNAPSHOT
  • org.cytoscape:session-api 3.10.0-SNAPSHOT
  • org.cytoscape:util-api 3.10.0-SNAPSHOT
  • org.cytoscape:webservice-api 3.10.0-SNAPSHOT
  • org.osgi:osgi.core ${osgi.api.version}
  • junit:junit test
  • org.mockito:mockito-core test
application-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:presentation-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
ci-api/pom.xml maven
  • javax.ws.rs:javax.ws.rs-api 2.0 provided
  • org.osgi:osgi.core ${osgi.api.version}
command-executor-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
core-task-api/pom.xml maven
  • org.cytoscape:io-api 3.10.0-SNAPSHOT
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:session-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
datasource-api/pom.xml maven
  • org.cytoscape:io-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
equations-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
event-api/pom.xml maven
  • junit:junit test
  • org.mockito:mockito-core test
filter-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
group-api/pom.xml maven
  • org.cytoscape:event-api 3.10.0-SNAPSHOT
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.cytoscape:event-api 3.10.0-SNAPSHOT test
  • org.mockito:mockito-core test
io-api/pom.xml maven
  • org.cytoscape:application-api 3.10.0-SNAPSHOT
  • org.cytoscape:filter-api 3.10.0-SNAPSHOT
  • org.cytoscape:presentation-api 3.10.0-SNAPSHOT
  • org.cytoscape:service-api 3.10.0-SNAPSHOT
  • org.cytoscape:session-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
jobs-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:session-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.cytoscape:event-api 3.10.0-SNAPSHOT test
  • org.mockito:mockito-core test
layout-api/pom.xml maven
  • org.cytoscape:core-task-api 3.10.0-SNAPSHOT
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:presentation-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
model-api/pom.xml maven
  • org.cytoscape:event-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.cytoscape:event-api 3.10.0-SNAPSHOT test
  • org.mockito:mockito-core test
pom.xml maven
  • org.ops4j.pax.logging:pax-logging-api 1.11.2 provided
  • junit:junit ${junit.version}
  • org.mockito:mockito-core ${mockito.version}
presentation-api/pom.xml maven
  • org.cytoscape:swing-util-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
property-api/pom.xml maven
  • com.sun.activation:javax.activation 1.2.0
  • com.sun.xml.bind:jaxb-core 2.3.0
  • com.sun.xml.bind:jaxb-impl 2.3.0
  • javax.xml.bind:jaxb-api 2.3.0
  • org.cytoscape:event-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
service-api/pom.xml maven
  • org.osgi:org.osgi.util.tracker 1.5.1 provided
  • org.osgi:osgi.cmpn ${osgi.compendium.version} provided
  • org.osgi:osgi.core ${osgi.api.version} provided
  • junit:junit test
  • org.mockito:mockito-core test
session-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:property-api 3.10.0-SNAPSHOT
  • org.cytoscape:vizmap-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
swing-app-api/pom.xml maven
  • org.cytoscape:app-api 3.10.0-SNAPSHOT
  • org.cytoscape:swing-application-api 3.10.0-SNAPSHOT
  • org.cytoscape:swing-util-api 3.10.0-SNAPSHOT
  • org.cytoscape:vizmap-gui-api 3.10.0-SNAPSHOT
  • org.cytoscape:webservice-swing-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-swing-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
swing-application-api/pom.xml maven
  • cytoscape-sun:jhall 1.0 provided
  • javax.help:javahelp 2.0.05
  • org.cytoscape:application-api 3.10.0-SNAPSHOT
  • org.cytoscape:service-api 3.10.0-SNAPSHOT
  • org.cytoscape:session-api 3.10.0-SNAPSHOT
  • org.cytoscape:swing-util-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-swing-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
swing-util-api/pom.xml maven
  • org.cytoscape:service-api 3.10.0-SNAPSHOT
  • org.cytoscape:util-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
taglets/pom.xml maven
  • junit:junit 4.13.1 test
  • org.mockito:mockito-core 1.8.1 test
util-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
viewmodel-api/pom.xml maven
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.cytoscape:service-api 3.10.0-SNAPSHOT test
  • org.mockito:mockito-core test
vizmap-api/pom.xml maven
  • org.cytoscape:event-api 3.10.0-SNAPSHOT
  • org.cytoscape:viewmodel-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.cytoscape:presentation-api 3.10.0-SNAPSHOT test
  • org.cytoscape:property-api 3.10.0-SNAPSHOT test
  • org.mockito:mockito-core test
vizmap-gui-api/pom.xml maven
  • org.cytoscape:presentation-api 3.10.0-SNAPSHOT
  • org.cytoscape:vizmap-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
webservice-api/pom.xml maven
  • org.cytoscape:io-api 3.10.0-SNAPSHOT
  • org.cytoscape:model-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
webservice-swing-api/pom.xml maven
  • org.cytoscape:webservice-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.cytoscape:webservice-api 3.10.0-SNAPSHOT test
  • org.mockito:mockito-core test
work-api/pom.xml maven
  • junit:junit test
  • org.mockito:mockito-core test
work-swing-api/pom.xml maven
  • org.cytoscape:property-api 3.10.0-SNAPSHOT
  • org.cytoscape:work-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test
cycl-api/pom.xml maven
  • org.cytoscape:application-api 3.10.0-SNAPSHOT
  • org.cytoscape:property-api 3.10.0-SNAPSHOT
  • junit:junit test
  • org.mockito:mockito-core test