https://github.com/danforthcenter/plantcv-tutorial-morphology
https://github.com/danforthcenter/plantcv-tutorial-morphology
Science Score: 39.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.8%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: danforthcenter
- License: cc-by-4.0
- Language: Jupyter Notebook
- Default Branch: main
- Size: 13 MB
Statistics
- Stars: 3
- Watchers: 5
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
PlantCV Sorghum Shape and Morphology Analysis
The side view morphology analysis tutorial provides examples of analysis used for side-view images of plants, including shape, leaf angle, and stem/branch analysis Check out our interactive tutorial below!
Tags/keywords
plant shoot, single plant, side-view, RGB, shape analysis, leaf angle analysis, stem and branch segmentation, leaf length, leaf curvature, leaf tangent angle,
Citations
Gehan MA, Fahlgren N, Abbasi A, Berry JC, Callen ST, Chavez L, Doust AN, Feldman MJ, Gilbert KB, Hodge JG, Hoyer JS, Lin A, Liu S, Lizárraga C, Lorence A, Miller M, Platon E, Tessman M, Sax T. 2017. PlantCV v2: Image analysis software for high-throughput plant phenotyping. PeerJ 5:e4088. DOI: 10.7717/peerj.4088.
Owner
- Name: Donald Danforth Plant Science Center
- Login: danforthcenter
- Kind: organization
- Location: St. Louis, MO
- Website: https://danforthcenter.org
- Repositories: 97
- Profile: https://github.com/danforthcenter
Our Mission: Improve the Human Condition Through Plant Science
GitHub Events
Total
- Watch event: 1
- Delete event: 4
- Push event: 11
- Pull request event: 6
- Create event: 2
Last Year
- Watch event: 1
- Delete event: 4
- Push event: 11
- Pull request event: 6
- Create event: 2
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Josh Sumner | 5****r | 4 |
| Haley Schuhl | 4****l | 3 |
| zeeuqsze | 1****e | 3 |
Issues and Pull Requests
Last synced: over 2 years ago
All Time
- Total issues: 0
- Total pull requests: 5
- Average time to close issues: N/A
- Average time to close pull requests: about 17 hours
- Total issue authors: 0
- Total pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 3
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 5
- Average time to close issues: N/A
- Average time to close pull requests: about 17 hours
- Issue authors: 0
- Pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 3
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
- zeeuqsze (7)