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Open Source Science

https://github.com/danforthcenter/plantcv-tutorial-template

A template for new PlantCV tutorial repositories

https://github.com/danforthcenter/plantcv-tutorial-template

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (9.4%) to scientific vocabulary

Keywords from Contributors

bioinformatics image-analysis plant-phenotyping plantcv
Last synced: 10 months ago · JSON representation

Repository

A template for new PlantCV tutorial repositories

Basic Info
  • Host: GitHub
  • Owner: danforthcenter
  • License: cc-by-4.0
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 15.1 MB
Statistics
  • Stars: 0
  • Watchers: 5
  • Forks: 3
  • Open Issues: 0
  • Releases: 0
Created about 5 years ago · Last pushed 10 months ago
Metadata Files
Readme License

README.md

Tutorial Title

Description of tutorial. (ex. Try out our interactive tutorial! Learn how to ... using PlantCV.)

Create a Binder launch button:

  1. Copy the GitHub repo URL
  2. Go to https://mybinder.org
  3. Replace plantcv-tutorial-template with the name of the repository you want a button made for.
  4. Copy the Markdown code for the button
  5. Delete these meta-instructions, optionally replace with your own.
  6. Launch to build the environment

Binder

Create a Google Colab button:

  1. Copy the markdown below these instructions to the README section below the Binder button.
  2. Replace plantcv-tutorial-template with the name of the repository you want a button made for.
  3. Make sure you have created the Google Colaboratory notebook for the tutorial so the button is correctly linked.

Colab

Create a GitHub Source button: (Omit this step if you are working GitHub tutorial repo README)

  1. Copy the GitHub repo URL
  2. Go to https://shields.io/badges/static-badge
  3. On the right-side panel, select +Show optional parameters
  4. Modify the parameters below to create a uniform button:
    • badgecontent: Open in GitHub-black
    • logo: github
  5. Select Markdown from the options of code.
  6. Modify the Markdown code to make it a clickable link using the following schema:
    • Static Badge

Static Badge

Tutorial tags/keywords

tag1, tag2, (e.g. data type, species featured, algorithm, etc) ...

Citations

Optional.

test-pr

Owner

  • Name: Donald Danforth Plant Science Center
  • Login: danforthcenter
  • Kind: organization
  • Location: St. Louis, MO

Our Mission: Improve the Human Condition Through Plant Science

GitHub Events

Total
  • Delete event: 8
  • Push event: 31
  • Pull request review event: 2
  • Pull request event: 22
  • Fork event: 3
  • Create event: 11
Last Year
  • Delete event: 8
  • Push event: 31
  • Pull request review event: 2
  • Pull request event: 22
  • Fork event: 3
  • Create event: 11

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 31
  • Total Committers: 4
  • Avg Commits per committer: 7.75
  • Development Distribution Score (DDS): 0.452
Past Year
  • Commits: 17
  • Committers: 4
  • Avg Commits per committer: 4.25
  • Development Distribution Score (DDS): 0.529
Top Committers
Name Email Commits
Noah Fahlgren n****n@g****m 17
zeeuqsze 1****e 8
leowlima l****a@d****g 4
Haley Schuhl 4****l 2
Committer Domains (Top 20 + Academic)
danforthcenter.org: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 0
  • Total pull requests: 13
  • Average time to close issues: N/A
  • Average time to close pull requests: 14 days
  • Total issue authors: 0
  • Total pull request authors: 3
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 6
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: 23 days
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • zeeuqsze (13)
  • nfahlgren (2)
  • HaleySchuhl (2)
Top Labels
Issue Labels
Pull Request Labels
documentation (5) enhancement (4)

Dependencies

requirements.txt pypi
  • plantcv ==3.12.1