https://github.com/danieldoehring/paper-2024-perk4
Reproducibility Repository for the paper "Fourth-Order Paired-Explicit Runge-Kutta Methods"
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
-
✓DOI references
Found 9 DOI reference(s) in README -
✓Academic publication links
Links to: arxiv.org, zenodo.org -
○Academic email domains
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (11.7%) to scientific vocabulary
Keywords
Repository
Reproducibility Repository for the paper "Fourth-Order Paired-Explicit Runge-Kutta Methods"
Basic Info
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 3
Topics
Metadata Files
README.md
paper-2024-perk4
This repository contains information and code to reproduce the results presented in the article
bibtex
@online{doehring2024fourth,
title={Fourth-Order Paired-Explicit Runge-Kutta Methods},
author={Doehring, Daniel and Christmann, Lars and Schlottke-Lakemper, Michael and Gassner, Gregor J.
and Torrilhon, Manuel},
year={2024},
eprint={2408.05470},
eprinttype={arxiv},
eprintclass={math.NA},
url={https://arxiv.org/abs/2408.05470},
journal={arXiv preprint arXiv:2408.05470},
doi={10.48550/arXiv.2408.05470}
}
If you find these results useful, please cite the article mentioned above. If you use the implementations provided here, please also cite this repository as
bibtex
@misc{doehring2024fourthRepro,
title={Reproducibility repository for "Fourth-Order Paired-Explicit Runge-Kutta Methods"},
author={Doehring, Daniel and Christmann, Lars and Schlottke-Lakemper, Michael and Gassner, Gregor J.
and Torrilhon, Manuel},
year={2024},
howpublished={\url{https://github.com/DanielDoehring/paper-2024-perk4}},
doi={https://doi.org/10.5281/zenodo.13899247}
}
Abstract
In this paper, we extend the Paired-Explicit Runge-Kutta (P-ERK) schemes by Vermeire et. al. [1,2] to fourth-order of consistency. Based on the order conditions for partitioned Runge-Kutta methods we motivate a specific form of the Butcher arrays which leads to a family of fourth-order accurate methods. The employed form of the Butcher arrays results in a special structure of the stability polynomials, which needs to be adhered to for an efficient optimization of the domain of absolute stability. The P-ERK schemes enable multirate time-integration with no changes in the spatial discretization methodology, making them readily implementable in existing codes that employ a method-of-lines approach.
We demonstrate that the constructed fourth-order P-ERK methods satisfy linear stability, internal consistency, designed order of convergence, and conservation of linear invariants. At the same time, these schemes are seamlessly coupled for codes employing a method-of-lines approach, in particular without any modifications of the spatial discretization. We demonstrate speedup for single-threaded program executions, shared-memory parallelism, i.e., multi-threaded executions and distributed-memory parallelism with MPI.
We apply the multirate P-ERK schemes to inviscid and viscous problems with locally varying wave speeds, which may be induced by non-uniform grids or multiscale properties of the governing partial differential equation. Compared to state-of-the-art optimized standalone methods, the multirate P-ERK schemes allow significant reductions in right-hand-side evaluations and wall-clock time, ranging from 66% up to factors greater than four.
A reproducibility repository is provided which enables the reader to examine all results presented in this work.
Reproducing the results
Installation
To download the code using git, use
bash
git clone git@github.com:DanielDoehring/paper-2024-perk4.git
If you do not have git installed you can obtain a .zip and unpack it:
bash
wget https://github.com/DanielDoehring/paper-2024-perk4/archive/refs/heads/main.zip
unzip main.zip
mv paper-2024-perk4-main/ paper-2024-perk4
To instantiate the Julia environment execute the following two commands:
bash
cd paper-2024-perk4/paper-2024-perk4-main/
julia --project=. -e 'using Pkg; Pkg.instantiate()'
Note that the results are obtained using Julia 1.10.4, which is also set in the Manifest.toml.
Thus, you might need to install the old Julia 1.10.4 release first
and replace the julia calls from this README with
/YOUR/PATH/TO/julia-1.10.4/bin/julia
Project initialization
If you installed Trixi.jl this way, you always have to start Julia with the --project flag set to your paper-2024-perk4 directory, e.g.,
bash
julia --project=.
if already inside the paper-2024-perk4 directory.
If you do not execute from the paper-2024-perk4 directory, you have to call julia with
bash
julia --project=/YOUR/PATH/TO/paper-2024-perk4
Running the code
The scripts for validations and applications are located in the 5_Validation and 6_Applications directory, respectively.
To execute them provide the respective path:
bash
julia --project=. ./5_Validation/5_1_LinearStability/elixir_advection_linear_stability.jl
For all cases in the applications directory the solution has been computed using a specific number of
threads.
To specify the number of threads the --threads flag needs to be specified, i.e.,
bash
julia --project=. --threads 24 ./6_Applications/6_4_SD7003Airfoil/Integrators_PERK4.jl
The number of threads used for the examples are given in the README.md in 6_Applications.
Authors
- Daniel Doehring (Corresponding Author)
- Lars Christmann
- Michael Schlottke-Lakemper
- Gregor J. Gassner
- Manuel Torrilhon
Note that the Trixi authors are listed separately here.
Disclaimer
Everything is provided as is and without warranty. Use at your own risk!
Owner
- Name: Daniel Doehring
- Login: DanielDoehring
- Kind: user
- Repositories: 13
- Profile: https://github.com/DanielDoehring
Graduate/PhD Computational Engineering & Science student
GitHub Events
Total
- Release event: 1
- Watch event: 1
- Push event: 5
- Create event: 2
Last Year
- Release event: 1
- Watch event: 1
- Push event: 5
- Create event: 2