cruiseplanning

A R package to support oceanographic cruise planning.

https://github.com/clayton33/cruiseplanning

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (8.2%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

A R package to support oceanographic cruise planning.

Basic Info
  • Host: GitHub
  • Owner: clayton33
  • Language: R
  • Default Branch: main
  • Size: 68.4 KB
Statistics
  • Stars: 1
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created about 2 years ago · Last pushed about 2 years ago
Metadata Files
Readme Citation

README.md

What cruisePlanning provides

The primary motivation to develop this package was to centralize and generalize the functionality of the original cruise planning script that was used to plan countless Fisheries and Oceans Canada Atlantic Zone Monitoring Program. At it's core, it does simple calculations to estimate the total time it would take to complete operations at a given set of stations. This helps Principal Investigators and/or Chief Scientists plan a mission, both prior and while at sea, by allowing them to run various scenarios to best utilize the allotted amount of ship time provided for them to complete their program.

How to download

This is currently a provisional package, so it is only available on github. To download :

library(remotes) remotes::install_github(repo = "clayton33/cruisePlanning", ref = "main", build_vignettes = TRUE)

General information

A comprehensive vignette has been written. To access, in an R Console

library(cruisePlanning) browseVignettes("cruisePlanning")

this will open up a local browser, click on the HTML link.

Owner

  • Name: Chantelle Layton
  • Login: clayton33
  • Kind: user
  • Location: Moncton, NB

Oceanographer at the Bedford Institute of Oceanography

Citation (CITATION.cff)

# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "cruisePlanning" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'cruisePlanning: Oceanographic Cruise Planning'
version: 0.1.0
abstract: Supports the planning of oceanographic cruises.
authors:
- family-names: Layton
  given-names: Chantelle
  email: Chantelle.Layton@dfo-mpo.gc.ca
  orcid: https://orcid.org/0000-0002-3199-5763
repository: https://github.com/clayton33/cruisePlanning
contact:
- family-names: Layton
  given-names: Chantelle
  email: Chantelle.Layton@dfo-mpo.gc.ca
  orcid: https://orcid.org/0000-0002-3199-5763
references:
- type: software
  title: oce
  abstract: 'oce: Analysis of Oceanographic Data'
  notes: Imports
  url: https://dankelley.github.io/oce/
  repository: https://CRAN.R-project.org/package=oce
  authors:
  - family-names: Kelley
    given-names: Dan
    email: Dan.Kelley@Dal.Ca
    orcid: https://orcid.org/0000-0001-7808-5911
  - family-names: Richards
    given-names: Clark
    email: clark.richards@gmail.com
    orcid: https://orcid.org/0000-0002-7833-206X
  year: '2024'
- type: software
  title: fields
  abstract: 'fields: Tools for Spatial Data'
  notes: Imports
  url: https://github.com/dnychka/fieldsRPackage
  repository: https://CRAN.R-project.org/package=fields
  authors:
  - family-names: Nychka
    given-names: Douglas
    email: douglasnychka@gmail.com
  - family-names: Furrer
    given-names: Reinhard
    email: reinhard.furrer@math.uzh.ch
  - family-names: Paige
    given-names: John
    email: paigejo@uw.edu
  - family-names: Sain
    given-names: Stephan
    email: sainsr2@gmail.com
  - family-names: Gerber
    given-names: Florian
    email: flora.fauna.gerber@gmail.com
  - family-names: Iverson
    given-names: Matthew
    email: miverson@mymail.mines.edu
  year: '2024'
- type: software
  title: utils
  abstract: 'R: A Language and Environment for Statistical Computing'
  notes: Imports
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2024'
- type: software
  title: leaflet
  abstract: 'leaflet: Create Interactive Web Maps with the JavaScript ''Leaflet''
    Library'
  notes: Imports
  url: https://rstudio.github.io/leaflet/
  repository: https://CRAN.R-project.org/package=leaflet
  authors:
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Schloerke
    given-names: Barret
    email: barret@posit.co
    orcid: https://orcid.org/0000-0001-9986-114X
  - family-names: Karambelkar
    given-names: Bhaskar
  - family-names: Xie
    given-names: Yihui
  year: '2024'
- type: software
  title: sf
  abstract: 'sf: Simple Features for R'
  notes: Imports
  url: https://r-spatial.github.io/sf/
  repository: https://CRAN.R-project.org/package=sf
  authors:
  - family-names: Pebesma
    given-names: Edzer
    email: edzer.pebesma@uni-muenster.de
    orcid: https://orcid.org/0000-0001-8049-7069
  year: '2024'
- type: software
  title: magrittr
  abstract: 'magrittr: A Forward-Pipe Operator for R'
  notes: Imports
  url: https://magrittr.tidyverse.org
  repository: https://CRAN.R-project.org/package=magrittr
  authors:
  - family-names: Bache
    given-names: Stefan Milton
    email: stefan@stefanbache.dk
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
  year: '2024'
- type: software
  title: RColorBrewer
  abstract: 'RColorBrewer: ColorBrewer Palettes'
  notes: Imports
  repository: https://CRAN.R-project.org/package=RColorBrewer
  authors:
  - family-names: Neuwirth
    given-names: Erich
    email: erich.neuwirth@univie.ac.at
  year: '2024'
- type: software
  title: htmlwidgets
  abstract: 'htmlwidgets: HTML Widgets for R'
  notes: Imports
  url: https://github.com/ramnathv/htmlwidgets
  repository: https://CRAN.R-project.org/package=htmlwidgets
  authors:
  - family-names: Vaidyanathan
    given-names: Ramnath
  - family-names: Xie
    given-names: Yihui
  - family-names: Allaire
    given-names: JJ
  - family-names: Cheng
    given-names: Joe
    email: joe@rstudio.com
  - family-names: Sievert
    given-names: Carson
    email: carson@rstudio.com
    orcid: https://orcid.org/0000-0002-4958-2844
  - family-names: Russell
    given-names: Kenton
  year: '2024'
- type: software
  title: knitr
  abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
  notes: Suggests
  url: https://yihui.org/knitr/
  repository: https://CRAN.R-project.org/package=knitr
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  year: '2024'
- type: software
  title: rmarkdown
  abstract: 'rmarkdown: Dynamic Documents for R'
  notes: Suggests
  url: https://pkgs.rstudio.com/rmarkdown/
  repository: https://CRAN.R-project.org/package=rmarkdown
  authors:
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Dervieux
    given-names: Christophe
    email: cderv@posit.co
    orcid: https://orcid.org/0000-0003-4474-2498
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Luraschi
    given-names: Javier
  - family-names: Ushey
    given-names: Kevin
    email: kevin@posit.co
  - family-names: Atkins
    given-names: Aron
    email: aron@posit.co
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
  - family-names: Iannone
    given-names: Richard
    email: rich@posit.co
    orcid: https://orcid.org/0000-0003-3925-190X
  year: '2024'
- type: software
  title: 'R: A Language and Environment for Statistical Computing'
  notes: Depends
  url: https://www.R-project.org/
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2024'
  version: '>= 2.10'

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Dependencies

DESCRIPTION cran
  • R >= 2.10 depends
  • RColorBrewer * imports
  • fields * imports
  • htmlwidgets * imports
  • leaflet * imports
  • magrittr * imports
  • oce * imports
  • sf * imports
  • utils * imports
  • knitr * suggests
  • rmarkdown * suggests