https://github.com/danilofreire/mixrf
A random-forest-based approach for imputing clustered incomplete data
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
○codemeta.json file
-
○.zenodo.json file
-
✓DOI references
Found 3 DOI reference(s) in README -
○Academic publication links
-
○Academic email domains
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (4.7%) to scientific vocabulary
Last synced: 10 months ago
·
JSON representation
Repository
A random-forest-based approach for imputing clustered incomplete data
Basic Info
- Host: GitHub
- Owner: danilofreire
- Language: R
- Default Branch: master
- Size: 180 KB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Fork of randel/MixRF
Created about 10 years ago
· Last pushed about 10 years ago
https://github.com/danilofreire/MixRF/blob/master/
MixRF
=====
### A random-forest-based approach for imputing clustered incomplete data
This `R` package offers random-forest-based functions to impute clustered incomplete data. The package is tailored for but not limited to imputing multitissue expression data, in which a gene's expression is measured on the collected tissues of an individual but missing on the uncollected tissues.
### Installation
- For the stable version from [CRAN](https://cran.r-project.org/web/packages/MixRF/index.html):
```r
install.packages('MixRF')
```
- For the development version (requiring the `devtools` package):
```r
devtools::install_github('randel/MixRF')
```
### Reference
Wang, J., Gamazon, E. R., Pierce, B. L., Stranger B. E., Im, H. K., Gibbons, R. D., Cox, N. J., Nicolae, D. L., & Chen, L. S. (2016). Imputing Gene Expression in Uncollected Tissues Within and Beyond GTEx. *American Journal of Human Genetics*. http://dx.doi.org/10.1016/j.ajhg.2016.02.020
Owner
- Name: Danilo Freire
- Login: danilofreire
- Kind: user
- Repositories: 87
- Profile: https://github.com/danilofreire