Recent Releases of Ripserer.jl

Ripserer.jl - v0.16.12

Ripserer v0.16.12

Diff since v0.16.11

Closed issues: - bad promote_rule (#161)

Merged pull requests: - Fix promote rules for Mod (#162) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 3 years ago

Ripserer.jl - v0.16.11

Ripserer v0.16.11

Diff since v0.16.10

Merged pull requests: - Fix bad link in docs (#157) (@mtsch) - CompatHelper: bump compat for MiniQhull to 0.4, (keep existing compat) (#160) (@github-actions[bot])

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

Ripserer.jl - v0.16.10

Ripserer v0.16.10

Diff since v0.16.9

Closed issues: - reconstruct_cycles in more than 2-dimension? (#145)

Merged pull requests: - Update Compat dependency, general maintenance (#156) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

Ripserer.jl - v0.16.9

Ripserer v0.16.9

Diff since v0.16.8

Merged pull requests: - Update CompatHelper to v3 (#152) (@mtsch) - Refresh formatting and tests (#153) (@mtsch) - Replace LightGraphs.jl with Graphs.jl (#154) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 4 years ago

Ripserer.jl - v0.16.8

Ripserer v0.16.8

Diff since v0.16.7

Merged pull requests: - Add references for involuted PH (#151) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 5 years ago

Ripserer.jl - v0.16.7

Ripserer v0.16.7

Diff since v0.16.6

Merged pull requests: - Document cycles.jl (#146) (@mtsch) - Update deps (#148) (@mtsch) - Update CompatHelper (#149) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 5 years ago

Ripserer.jl - v0.16.6

Ripserer v0.16.6

Diff since v0.16.5

Merged pull requests: - CompatHelper: bump compat for "MiniQhull" to "0.3" (#144) (@github-actions[bot])

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 5 years ago

Ripserer.jl - v0.16.5

Ripserer v0.16.5

Diff since v0.16.4

Merged pull requests: - CompatHelper: bump compat for "MLJModelInterface" to "0.4" (#143) (@github-actions[bot])

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 5 years ago

Ripserer.jl - v0.16.4

Ripserer v0.16.4

Diff since v0.16.3

Merged pull requests: - MLJ interface (#140) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 5 years ago

Ripserer.jl - v0.16.3

Ripserer v0.16.3

Diff since v0.16.2

Merged pull requests: - Docs updates, add midlife (#139) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 5 years ago

Ripserer.jl - v0.16.2

Ripserer v0.16.2

Diff since v0.16.1

Merged pull requests: - Small fix in zero-dimensional cubical PH computation (#136) (@mtsch) - README update and new logo (#137) (@mtsch) - Fix logo link in README (#138) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 5 years ago

Ripserer.jl - v0.16.1

Ripserer v0.16.1

Diff since v0.16.0

Merged pull requests: - CompatHelper: bump compat for "StaticArrays" to "1.0" (#135) (@github-actions[bot])

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 5 years ago

Ripserer.jl - v0.16.0

Ripserer v0.16.0

Diff since v0.15.5

Merged pull requests: - New Chain type (#122) (@mtsch) - Circular coordinates (#123) (@mtsch) - Fix representative cocycles for infinite intervals (#124) (@mtsch) - Optimize vertices for 1-simplices (#125) (@mtsch) - Simplex rework (#126) (@mtsch) - Migrate to GitHub actions (#128) (@mtsch) - Fix docs and plotting (#129) (@mtsch) - Update GitHub CI testing, benchmark Alpha (#130) (@mtsch) - Add new interface for calling ripserer (#131) (@mtsch) - Update benchmarks (#132) (@mtsch) - Tweak heapmove, bump version (#133) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.15.5

Ripserer v0.15.5

Diff since v0.15.4

Merged pull requests: - Add EdgeCollapsedRips (#121) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.15.4

Ripserer v0.15.4

Diff since v0.15.3

Merged pull requests: - Formatting (#117) (@mtsch) - Add CITATION.bib and JOSS badge (#118) (@mtsch) - Fix error in benchmark report (#119) (@mtsch) - Use PersistenceDiagrams v0.8 (#120) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.15.3

Ripserer v0.15.3

Diff since v0.15.2

Merged pull requests: - Add Zenodo badge (#114) (@mtsch) - Fix type instability in zeroth interval generation (#116) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.15.2

Ripserer v0.15.2

Diff since v0.15.1

Merged pull requests: - CompatHelper: bump compat for "Distances" to "0.10" (#111) (@github-actions[bot]) - JOSS: Add missing links to references (#112) (@mtsch) - Bump version, reorder tests (#113) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.15.1

Ripserer v0.15.1

Diff since v0.15.0

Merged pull requests: - Update benchmarks (#105) (@mtsch) - Resolve ambiguities with convert (#106) (@mtsch) - Improve representatives docs (#107) (@mtsch) - Add benchmark that favors Eirene (#108) (@mtsch) - Compute cocycles for infinite intervals (#109) (@mtsch) - Revert progress meter dt in zerodimensional, bump version (#110) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.15.0

Ripserer v0.15.0

Diff since v0.14.7

Closed issues: - [JOSS] Add section to the README and DOCS about related efforts in Julia (#94)

Merged pull requests: - Joss paper (#89) (@mtsch) - Joss paper update (#90) (@mtsch) - remove invalid doi (#91) (@mtsch) - Add optional apparent pair finding step (#93) (@mtsch) - Add information about other Julia packages (#95) (@mtsch) - Add DOI for Persistent Homology - a Survey (#96) (@mtsch) - JOSS: Add more references (#97) (@mtsch) - Filtration refactor (#98) (@mtsch) - Benchmark CI update (#99) (@mtsch) - Minor fixes (#100) (@mtsch) - Representative cycles from cocycles (#101) (@mtsch) - Add homology benchmarks (#102) (@mtsch) - Taking homology seriously (#103) (@mtsch) - Organization before v0.15 (#104) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.7

Ripserer v0.14.7

Diff since v0.14.6

Merged pull requests: - Update title plot (#87) (@mtsch) - Refactoring (#88) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.6

Ripserer v0.14.6

Diff since v0.14.5

Merged pull requests: - Alpha Filtrations (#84) (@mtsch) - Test more platforms, drop AppVeyor (#85) (@mtsch) - Add compat bounds for MiniQhull (#86) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.5

Ripserer v0.14.5

Diff since v0.14.4

Merged pull requests: - CompatHelper: bump compat for "DataStructures" to "0.18" (#82) (@github-actions[bot]) - Add CustomFiltration (#83) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.4

Ripserer v0.14.4

Diff since v0.14.3

Merged pull requests: - Docs updates (#80) (@mtsch) - Packed element fix (#81) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.3

Ripserer v0.14.3

Diff since v0.14.2

Merged pull requests: - Add SparseRips constructor with point cloud inputs (#79) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.2

Ripserer v0.14.2

Diff since v0.14.1

Merged pull requests: - Fix interval type inference problem (#78) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.1

Ripserer v0.14.1

Diff since v0.14.0

Merged pull requests: - Small Fix in Simplex Interface Docs (#75) (@mtsch) - Docs Fixes and Tweaks (#76) (@mtsch) - Update PersistenceDiagrams (#77) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.14.0

Ripserer v0.14.0

Diff since v0.13.1

Merged pull requests: - Zerodimensional Generalization (#71) (@mtsch) - Taking Cubical Homology Seriously (#72) (@mtsch) - Improve Progress Meter (#73) (@mtsch) - Better Benchmarks (#74) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.13.1

Ripserer v0.13.1

Diff since v0.13.0

Merged pull requests: - Bump PersistenceDiagrams Version (#70) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.13.0

Ripserer v0.13.0

Diff since v0.12.0

Merged pull requests: - Make simplex_type a Trait (#62) (@mtsch) - Use simplex_type Trait in simplex, Parametrize Filtrations (#63) (@mtsch) - Better Coboundary Benchmark (#64) (@mtsch) - Remove Argument Types to Make Overloading Easier (#66) (@mtsch) - Small Tweak in WorkingBoundary (#67) (@mtsch) - Fix benchmark.yml (#68) (@mtsch) - fix version (#69) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.12.0

Ripserer v0.12.0

Diff since v0.11.0

Merged pull requests: - New Way of Getting Simplices From Filtrations (#60) (@mtsch) - Calculate n_vertices from dist in Rips filtrations, fix unsafe_cofacet (#61) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.11.0

Ripserer v0.11.0

Diff since v0.10.0

Merged pull requests: - [WIP] Refactoring. (#59) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.10.0

Ripserer v0.10.0

Diff since v0.9.0

Merged pull requests: - Docs Updates (#56) (@mtsch) - Add missing imports, fix typos (#57) (@mtsch) - Cleanup (#58) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.9.0

Ripserer v0.9.0

Diff since v0.8.2

Merged pull requests: - New Way Of Handling Representatives (#55) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.8.2

Ripserer v0.8.2

Diff since v0.8.1

Merged pull requests: - Fix Bug With Filenames (#54) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.8.1

Ripserer v0.8.1

Diff since v0.8.0

Merged pull requests: - Fix Minor Bugs in check_overflow (#53) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.8.0

Ripserer v0.8.0

Diff since v0.7.0

Merged pull requests: - Simplices are Arrays (#51) (@mtsch) - Bump PersistenceDiagrams.jl version (#52) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.7.0

Ripserer v0.7.0

Diff since v0.6.4

Merged pull requests: - Homology (#49) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.6.4

Ripserer v0.6.4

Diff since v0.6.3

Merged pull requests: - Fix Type Instabilites in Cubical Persistence (#50) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.6.3

Ripserer v0.6.3

Diff since v0.6.2

Merged pull requests: - Column Tweaks (#48) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.6.2

Ripserer v0.6.2

Diff since v0.6.1

Merged pull requests: - Add Missing Import (#47) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.6.1

Ripserer v0.6.1

Diff since v0.6.0

Merged pull requests: - Performance Improvements (#46) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago

Ripserer.jl - v0.6.0

Ripserer v0.6.0

Diff since v0.5.0

Closed issues: - Codecov migration to marketplace app (#44)

Merged pull requests: - Refactoring (#45) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago

Ripserer.jl - v0.5.0

Ripserer v0.5.0

Diff since v0.4.1

Merged pull requests: - CompatHelper: bump compat for "Distances" to "0.9" (#42) (@github-actions[bot]) - Bottleneck and Wasserstein Distance (#43) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago

Ripserer.jl - v0.4.1

Ripserer v0.4.1

Diff since v0.4.0

Merged pull requests: - Packed Elements (#41) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago

Ripserer.jl - v0.4.0

Ripserer v0.4.0

Diff since v0.3.0

Merged pull requests: - Usability Improvements (#39) (@mtsch) - fix versions in Project.toml add CompatHelper (#40) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago

Ripserer.jl - v0.3.0

Ripserer v0.3.0

Diff since v0.2.0

Merged pull requests: - Code Simplification and Performance Tweaks (#35) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago

Ripserer.jl - v0.2.0

Ripserer v0.2.0

Diff since v0.1.0

Merged pull requests: - Internal Changes and Cubical Complexes (#34) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago

Ripserer.jl - v0.1.0

Ripserer v0.1.0

Merged pull requests: - julia v1.0 compatibility (#1) (@mtsch) - Add thresholding support. (#2) (@mtsch) - Cleanup. (#3) (@mtsch) - Sparse Filtrations (#4) (@mtsch) - Update README and docstrings, fix some incosistencies with distances. (#5) (@mtsch) - Use Aqua.jl in testing, remove incosistency. (#6) (@mtsch) - Add benchmarking and github action to post them. (#7) (@mtsch) - Refactoring (#8) (@mtsch) - Benchmarks (#9) (@mtsch) - Smarter way to push and look at top entry in column (#10) (@mtsch) - Streamline sparse benchmarks (#11) (@mtsch) - Better column assembly (#12) (@mtsch) - Performance Tweaks (#13) (@mtsch) - Update README.md, merge max_dist with diam. (#14) (@mtsch) - Add Documenter docs. (#15) (@mtsch) - Move documentation build to travis. (#16) (@mtsch) - Simplex Code Cleanup (#17) (@mtsch) - Add Logo and Icon to Docs (#18) (@mtsch) - Separate Coboundary and Vertex Calculation From Filtrations (#19) (@mtsch) - Change Indexing Order in diam and Handle Thresholding Differently (#20) (@mtsch) - Improve Coboundary Benchmarks (#21) (@mtsch) - Another Overhaul (#22) (@mtsch) - Update Docs (#23) (@mtsch) - Add Cocycle Support (#24) (@mtsch) - Add Support for Lower Star Filtrations (#25) (@mtsch) - Improve Benchmarks (#26) (@mtsch) - Make Sure All Benchmarks Take at Least a Few Seconds (#27) (@mtsch) - 0-dimensional Representatives (#28) (@mtsch) - Cleanup (#29) (@mtsch) - Add Simplex Plots (#30) (@mtsch) - Docs (#31) (@mtsch) - Add Julia TagBot (#32) (@mtsch) - Prepare Package for Registration (#33) (@mtsch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 6 years ago