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brc_pipeline

The BRC Pipeline scripts are being released for processing magnetic resonance imaging (MRI) data. This processing pipeline could be applied to different modalities such as T1w/T2w MRI, diffusion MRI, and functional MRI datasets.

https://github.com/spmic-uon/brc_pipeline

Science Score: 57.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 6 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
  • ✓
    Institutional organization owner
    Organization spmic-uon has institutional domain (www.nottingham.ac.uk)
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.4%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

The BRC Pipeline scripts are being released for processing magnetic resonance imaging (MRI) data. This processing pipeline could be applied to different modalities such as T1w/T2w MRI, diffusion MRI, and functional MRI datasets.

Basic Info
  • Host: GitHub
  • Owner: SPMIC-UoN
  • Language: Shell
  • Default Branch: master
  • Homepage:
  • Size: 103 MB
Statistics
  • Stars: 16
  • Watchers: 7
  • Forks: 2
  • Open Issues: 0
  • Releases: 71
Created over 7 years ago · Last pushed 6 months ago
Metadata Files
Readme Citation

README.md

BRC Pipeline

[![Status](https://img.shields.io/badge/status-active-success.svg)]() [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.4966682.svg)](https://doi.org/10.5281/zenodo.4966682) [![Release](https://img.shields.io/github/release/SPMIC-UoN/BRC_Pipeline)](https://github.com/SPMIC-UoN/BRC_Pipeline/releases/latest) [![Stars](https://img.shields.io/github/stars/SPMIC-UoN/BRC_Pipeline)](https://github.com/SPMIC-UoN/BRC_Pipeline/stargazers) [![Forks](https://img.shields.io/github/forks/SPMIC-UoN/BRC_Pipeline)](https://github.com/SPMIC-UoN/BRC_Pipeline/network/members) [![Size](https://img.shields.io/github/languages/code-size/SPMIC-UoN/BRC_Pipeline)]()

BRC Pipeline

The BRC Pipeline scripts are being released for processing magnetic resonance imaging (MRI) data. This processing pipeline could be applied to different modalities such as T1w/T2w MRI, diffusion MRI, and functional MRI datasets. Also, it can be used for functional connectivity and network analysis.

Installation

The instruction of step by step installation is available at the Release Notes, Installation, and Usage document for the current release.

Support

Before contacting us, please try the following:

  1. The wiki has tutorials on how to install and run the pipeline for different modalities.
  2. Common issues are described in the FAQ If that doesn't work, you can get in touch with us!

How do I cite the pipeline?

Each version of the pipeline has its own DOI. The above shiny badge shows the DOI of the last version. However, by clicking on this badge, you can find different DOIs of different versions. You can cite all versions by using the DOI 10.5281/zenodo.3624973. This DOI represents all versions, and will always resolve to the latest one.

  • Cite as:

    Ali-Reza Mohammadi-Nejad, Stefan Pszczolkowski, Dorothee Auer, Stamatios Sotiropoulos. Multi-modal 
neuroimaging pipelines for data preprocessing. Zenodo. http://doi.org/10.5281/zenodo.3624973

Versions

Owner

  • Name: SPMIC
  • Login: SPMIC-UoN
  • Kind: organization
  • Location: The University of Nottingham

The Sir Peter Mansfield Imaging Centre

GitHub Events

Total
  • Release event: 3
  • Watch event: 2
  • Push event: 3
  • Gollum event: 1
  • Create event: 3
Last Year
  • Release event: 3
  • Watch event: 2
  • Push event: 3
  • Gollum event: 1
  • Create event: 3