Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
-
○Academic publication links
-
○Academic email domains
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (6.3%) to scientific vocabulary
Repository
Automatically generate sampling grid for photos
Basic Info
- Host: GitHub
- Owner: jazzbuck
- License: mit
- Language: Python
- Default Branch: main
- Size: 15.6 KB
Statistics
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
imgsmply
Pronounced "image sarm-plee", imgsmply is a program that looks through a directory and samples every .tiff in that directory.
It samples from a grid overlay, and then draws its sampled cells.
Finally, it produces a csv with the grid locations.
installation
To install requirements:
shell
pip install -r requirements.txt
running
To run:
python
python main.py
configuration options
input_path: location of directory of .tiff files
output_dir: location where outputs will be placed
pixels_per_mm: scale, not used
grid_number: [number of cells in y direction, number of cells in x direction] - this divides the image equally. If choosing the size of an individual cell use grid_size instead and comment this out.
grid_size: [size of cell in pixels y direction, size of cell in pixels x direction] - this creates a grid based on cells of the chosen size. If dividing the image into equal divisions use grid_number instead and comment this out.
number_of_samples: number of cells to sample (without replacement)
downsample_ratio: relative size of outlined version of input file
seed: random seed for reproducibility
how: either "simple" or "rowwise" at the moment. Simple creates a sample of size number_of_samples from the entire grid, whilst rowwise takes a sample of size number_of_samples from each row of the image.
Owner
- Login: jazzbuck
- Kind: user
- Repositories: 2
- Profile: https://github.com/jazzbuck
Citation (CITATION.cff)
cff-version: 1.2.0 message: "If you use this software, please cite it as below." authors: - family-names: "Newton" given-names: "Alexander" title: "imgsmply - create sampling grid for photos" version: 0.0.1 date-released: 2022-01-20 url: "https://github.com/jazzbuck/imgsmply"
GitHub Events
Total
Last Year
Dependencies
- numpy *
- pillow *
- pyyaml *
- scikit-image *