biocommons-utilities
https://github.com/australianbiocommons/biocommons-utilities
Science Score: 57.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (10.3%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: AustralianBioCommons
- License: apache-2.0
- Language: Python
- Default Branch: master
- Size: 14.6 KB
Statistics
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
Biocommons utilities
Delete this section when the first version of the documentation is complete
You can make use of this template repository as a base template for a new GitHub repository.
General information about the guidelines - This template repository contains a set of guidelines for documenting bioinformatics tools and workflows. - There is a How-to-Guide to using this repository available here: https://australianbiocommons.github.io/how-to-guides/documentation/DocumentationGuidelines - The initial version uploaded to GitHub was informed by current documentation practices and structures used in the GitHub community. - Typical files are included, such as a
LICENSE,CITATION.cffandchange_log.md- These guidelines will be further developed as needed to meet the requirements of the Australian BioCommons community.
General recommendations
Recommendations on using the workflow: for example, based on data set size, infrastructure suitability.
Resources available here
This repository contains structured documentation for [workflow name], including links to existing repositories and community resources, as well as a description of the optimisations achieved on the following compute systems:
- system name
- ...
Attributions
The guideline template is supported by the Australian BioCommons via Bioplatforms Australia funding, the Australian Research Data Commons (https://doi.org/10.47486/PL105) and the Queensland Government RICF programme. Bioplatforms Australia and the Australian Research Data Commons are enabled by the National Collaborative Research Infrastructure Strategy (NCRIS).
The BioCommons would also like to acknowledge the contributions of the following individuals and institutions to these documentation guidelines:
- Johan Gustafsson (Australian BioCommons, University of Melbourne) @supernord
- Brian Davis (National Computational Infrastructure) @Davisclan
- Marco de la Pierre (Pawsey Supercomputing Centre) @marcodelapierre
- Audrey Stott (Pawsey Supercomputing Centre) @audreystott
- Sarah Beecroft (Pawsey Supercomputing Centre) @SarahBeecroft
- Matthew Downton (National Computational Infrastructure) @mattdton
- Richard Edwards (University of New South Wales) @cabbagesofdoom
- Tracy Chew (University of Sydney) @tracychew
- Georgina Samaha (University of Sydney) @georgiesamaha
Owner
- Name: AustralianBioCommons
- Login: AustralianBioCommons
- Kind: organization
- Email: systems@biocommons.org.au
- Website: https://www.biocommons.org.au/
- Repositories: 17
- Profile: https://github.com/AustralianBioCommons
Documentation for the development, deployment and/or optimisation of key community-endorsed bioinformatics tools and workflows
Citation (CITATION.cff)
cff-version: 0.0.0
message: "If you use these utilities, please cite as below."
authors:
- family-names: Gustafsson
given-names: Johan
orcid: https://orcid.org/0000-0002-2977-5032
title: "Australian BioCommons utilities"
version: 0.0.0
doi:
date-released: YYYY-MM-DD