Science Score: 54.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.5%) to scientific vocabulary
Keywords
analysis
atac-seq
bioinformatics
dna
genomics
illumina
nyu
pipeline
rna-seq
rrbs
sequencing
wes
wgbs
wgs
Last synced: 4 months ago
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JSON representation
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Repository
Analysis pipelines for genomic sequencing data
Basic Info
- Host: GitHub
- Owner: igordot
- License: mit
- Language: Shell
- Default Branch: main
- Homepage: https://igordot.github.io/sns/
- Size: 542 KB
Statistics
- Stars: 69
- Watchers: 7
- Forks: 27
- Open Issues: 0
- Releases: 6
Topics
analysis
atac-seq
bioinformatics
dna
genomics
illumina
nyu
pipeline
rna-seq
rrbs
sequencing
wes
wgbs
wgs
Created over 9 years ago
· Last pushed 4 months ago
Metadata Files
Readme
License
Citation
README.md
Seq-N-Slide: sequencing data analysis pipelines
Seq-N-Slide is a set of streamlined analysis workflows for common genomic sequencing assays, such as RNA-seq, ATAC-seq, ChIP-seq, WGS/WES, and WGBS/RRBS.
For more information, see the full documentation at https://igordot.github.io/sns
Owner
- Name: igor
- Login: igordot
- Kind: user
- Location: New York, NY, USA
- Company: New York University School of Medicine
- Repositories: 7
- Profile: https://github.com/igordot
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you find this software useful, please cite it using these metadata."
title: "Seq-N-Slide"
abstract: "Seq-N-Slide is a set of streamlined analysis pipelines for common genomic sequencing assays, such as RNA-seq, ATAC-seq, ChIP-seq, WGS/WES, and WGBS/RRBS. Documentation is available at https://igordot.github.io/sns"
type: software
authors:
- orcid: "https://orcid.org/0000-0003-4451-126X"
given-names: Igor
family-names: Dolgalev
repository-code: "https://github.com/igordot/sns"
url: "https://igordot.github.io/sns"
doi: 10.5281/zenodo.5550459
identifiers:
- description: "Archived snapshots of Seq-N-Slide"
type: doi
value: "10.5281/zenodo.5550459"
- description: "SciCrunch Research Resource Identifier for Seq-N-Slide"
type: other
value: "RRID:SCR_021752"
license: MIT
GitHub Events
Total
- Create event: 1
- Release event: 1
- Issues event: 4
- Watch event: 8
- Issue comment event: 3
- Push event: 6
- Fork event: 1
Last Year
- Create event: 1
- Release event: 1
- Issues event: 4
- Watch event: 8
- Issue comment event: 3
- Push event: 6
- Fork event: 1