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pypillometry

pypillometry: A Python package for pupillometric analyses - Published in JOSS (2020)

https://github.com/ihrke/pypillometry

Science Score: 93.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 4 DOI reference(s) in README and JOSS metadata
  • ✓
    Academic publication links
    Links to: joss.theoj.org, zenodo.org
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ✓
    JOSS paper metadata
    Published in Journal of Open Source Software

Keywords

data data-analysis eye-tracking eyetracking pupillometry

Scientific Fields

Mathematics Computer Science - 84% confidence
Last synced: 4 months ago · JSON representation

Repository

Pupillometry and eyetracking with python

Basic Info
Statistics
  • Stars: 32
  • Watchers: 1
  • Forks: 12
  • Open Issues: 8
  • Releases: 12
Topics
data data-analysis eye-tracking eyetracking pupillometry
Created about 6 years ago · Last pushed 8 months ago
Metadata Files
Readme License

README.md

Welcome to pypillometry (v2)!

GitHub issues status DOI codecov tests

GitHub release PyPI version

[!NOTE] This is pypillometry version 2 that contains a major restructuring of the code. Scripts written for version 1 will not continue to work. The reason for the update is that the new version will be able to handle eyetracking-data in addition to pupillometry data (and it will be able to handle more than one eye and other data sources at the same time).

The documentation for v2 is currently incomplete and broken as we focus on developing the new API.

This package implements functions for the analysis of pupillometric and eyetracking data. Features include preprocessing, blink handling, event-related pupil-dilation, plotting and signal modeling.

The project is maintained by Matthias Mittner matthias.mittner@uit.no

To report a bug or recommend a new feature, please use github's issue tracker.

For more details about how to contribute, please see the contribution-section in the documentation.

Owner

  • Name: Matthias Mittner
  • Login: ihrke
  • Kind: user
  • Location: Tromsø, Norway
  • Company: University of Tromsø

JOSS Publication

pypillometry: A Python package for pupillometric analyses
Published
July 02, 2020
DOI
Volume 5, Issue 51, Page 2348
Authors
Matthias Mittner ORCID
Institute for Psychology, UiT The Arctic University of Norway, Norway
Editor
Olivia Guest ORCID
Tags
pupil pupillometry psychology neuroscience LC-NE
View PDF Review Thread Software Archive

GitHub Events

Total
  • Create event: 4
  • Release event: 2
  • Issues event: 3
  • Watch event: 4
  • Issue comment event: 4
  • Push event: 104
Last Year
  • Create event: 4
  • Release event: 2
  • Issues event: 3
  • Watch event: 4
  • Issue comment event: 4
  • Push event: 104

Committers

Last synced: 5 months ago

All Time
  • Total Commits: 316
  • Total Committers: 3
  • Avg Commits per committer: 105.333
  • Development Distribution Score (DDS): 0.028
Past Year
  • Commits: 140
  • Committers: 2
  • Avg Commits per committer: 70.0
  • Development Distribution Score (DDS): 0.029
Top Committers
Name Email Commits
Matthias Mittner m****r@u****o 307
release-manager a****s@g****m 8
Weronika Sójka 6****0 1
Committer Domains (Top 20 + Academic)
github.com: 1 uit.no: 1

Issues and Pull Requests

Last synced: 4 months ago

All Time
  • Total issues: 21
  • Total pull requests: 2
  • Average time to close issues: 6 months
  • Average time to close pull requests: over 1 year
  • Total issue authors: 12
  • Total pull request authors: 2
  • Average comments per issue: 1.48
  • Average comments per pull request: 1.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 2
  • Pull requests: 0
  • Average time to close issues: 3 months
  • Average time to close pull requests: N/A
  • Issue authors: 2
  • Pull request authors: 0
  • Average comments per issue: 1.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • ihrke (6)
  • samhforbes (4)
  • szorowi1 (2)
  • nadhya-p (1)
  • joebathelt (1)
  • jaweriaamjad (1)
  • koertstribos (1)
  • wsojka00 (1)
  • tabea-brdl (1)
  • jtmbeta (1)
  • hauselin (1)
  • rkd1 (1)
  • acooperr1 (1)
Pull Request Authors
  • deron2 (1)
  • wsojka00 (1)
Top Labels
Issue Labels
joss-review (6) propose-close (6) enhancement (3) 2.0 (3) documentation (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 20 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 4
  • Total maintainers: 1
pypi.org: pypillometry

Pupillometry in Python.

  • Versions: 4
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 20 Last month
Rankings
Dependent packages count: 10.1%
Forks count: 11.4%
Stargazers count: 13.7%
Dependent repos count: 21.6%
Average: 21.8%
Downloads: 52.5%
Maintainers (1)
mmittner
Last synced: 4 months ago

Dependencies

requirements.txt pypi
  • matplotlib *
  • numpy *
  • pandas *
  • pystan *
  • requests *
  • scipy *
  • typing *
.github/workflows/python-publish.yml actions
  • EndBug/add-and-commit v4.2.0 composite
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
setup.py pypi