active-dna-transposons-in-animals
https://github.com/clamp131/active-dna-transposons-in-animals
Science Score: 44.0%
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✓codemeta.json file
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○Scientific vocabulary similarity
Low similarity (0.8%) to scientific vocabulary
Last synced: 6 months ago
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Repository
Basic Info
- Host: GitHub
- Owner: clamp131
- Language: Perl
- Default Branch: main
- Size: 225 KB
Statistics
- Stars: 2
- Watchers: 1
- Forks: 1
- Open Issues: 0
- Releases: 1
Created over 2 years ago
· Last pushed over 2 years ago
Metadata Files
Readme
Citation
README.md
Active-DNA-transposons-in-animals
Codes and commands for detecting active DNA transposons especially TIR TEs in animals
- Identification of candidate DNA TEs in 100 animal reference genomes
- Identification of candidate DNA TEs in de novo assembled genomes
- Prediction of TIR and TSD
- Finding direct repeats at the ends of TEs
- Evolutionary modes of MITEs
- Identification of conserved residues
- Insertion site mapping of active TEs
For information inquiry please email Shengjun Tan (tanshengjun@ioz.ac.cn).
Owner
- Name: Shengjun Tan
- Login: clamp131
- Kind: user
- Repositories: 1
- Profile: https://github.com/clamp131
Citation (CITATION.cff)
cff-version: 1.0
message: "If you use this software, please cite it as below."
authors:
- family-names: Shengjun
given-names: Tan
orcid: https://orcid.org/0000-0002-5422-8698
title: clamp131/Active-DNA-transposons-in-animals: DNA_TEs
version: v1.0
date-released: 2023-07-03