Recent Releases of replitimer
replitimer - v1.0.11
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.10...v1.0.11
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.10
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.9...v1.0.10
- R
Published by sansamcl almost 4 years ago
replitimer - v.1.0.9
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.8...v1.0.9
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.8
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.7...v1.0.8
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.7
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.6...v1.0.7
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.6
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.5...v1.0.6
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.5
Full Changelog: https://github.com/SansamLab/RepliTimer/compare/v1.0.4...v1.0.5
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.4
Full Changelog: https://github.com/SansamLab/ProcessRepTimingSnakemake/compare/v1.0.2...v1.0.4
- R
Published by sansamcl almost 4 years ago
replitimer - v1.0.3
Full Changelog: https://github.com/SansamLab/ProcessRepTimingSnakemake/compare/v1.0.1...v1.0.3
- R
Published by sansamcl almost 4 years ago
replitimer - v0.2.0-alpha
Added functionality
- processes counts in smoothed and transformed (log2 or z-score) values
- outputs .rds file with RangedSummarizedExperiment for analysis in R
- outputs. bedgraphs will all values
- calculates medians if replicate-id column is included in .csv file
- R
Published by sansamcl almost 4 years ago
replitimer - first release
Full Changelog: https://github.com/SansamLab/ProcessRepTimingSnakemake/commits/v0.1.0-alpha
This version processes sequencing data and generates bedgraphs of read counts in given replication timing windows. It was tested on the included test fastqs.
- R
Published by sansamcl almost 4 years ago