template

template for pathology atlas repositories

{{< include ./subchapters/template.qmd >}}

see [make-html-WSI](https://github.com/pathologyatlas/make-html-WSI) for more information and [TODO](https://github.com/pathologyatlas/TODO) to add cases

``` update html file heading:

```

```zsh

vips dzsave HE.svs HE

```

``` update html file to match .dzi file

```

consider using git_push.sh script to upload files to github, since the number of generated files is huge

after upload complete, do not forget to activate github pages for the new repository

https://images.patolojiatlasi.com/template/

https://images.patolojiatlasi.com/template/HE1.html

TemplateTR

Tam Ekran Grmek in Resmi Tklayn

TemplateEN

Click for Full Screen WSI

Mikroskopik grntleri inceleyin:

See Microscopy with viewer:

https://images.patolojiatlasi.com/template/

https://images.patolojiatlasi.com/template/HE2.html

TemplateTR

Tam Ekran Grmek in Resmi Tklayn

TemplateEN

Click for Full Screen WSI

Mikroskopik grntleri inceleyin:

See Microscopy with viewer:

yaml - stainname: template-HE1 reponame: template titleTR: TemplateTR titleEN: TemplateEN organTR: '' organEN: '' speciality: '' type: published author: - Serdar Balci - Memorial Patoloji date: 2024-03-09 url: https://images.patolojiatlasi.com/template/HE1.html note: '' categoriesTR: - '' - '' - '' - patoloji - atlas - histopatoloji - whole slide image categoriesEN: - '' - '' - '' - pathology - atlas - histopathology - whole slide image screenshot: https://www.patolojiatlasi.com/screenshots/thumbnail_template-HE1.png github: https:///github.com/pathologyatlas/template githubpage: https://pathologyatlas.github.io/template youtube: https://www.youtube.com/watch?v=youtube_link

yaml - stainname: template-HE2 reponame: template titleTR: TemplateTR titleEN: TemplateEN organTR: '' organEN: '' speciality: '' type: published author: - Serdar Balci - Memorial Patoloji date: 2024-03-09 url: https://images.patolojiatlasi.com/template/HE2.html note: '' categoriesTR: - '' - '' - '' - patoloji - atlas - histopatoloji - whole slide image categoriesEN: - '' - '' - '' - pathology - atlas - histopathology - whole slide image screenshot: https://www.patolojiatlasi.com/screenshots/thumbnail_template-HE2.png github: https:///github.com/pathologyatlas/template githubpage: https://pathologyatlas.github.io/template youtube: https://www.youtube.com/watch?v=youtube_link