taxo_scorer
Script to proceed to taxonomically informed scoring in metabolite annotation
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (0.6%) to scientific vocabulary
Last synced: 10 months ago
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Repository
Script to proceed to taxonomically informed scoring in metabolite annotation
Basic Info
- Host: GitHub
- Owner: oolonek
- Language: Jupyter Notebook
- Default Branch: master
- Size: 4.28 MB
Statistics
- Stars: 4
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Created almost 7 years ago
· Last pushed over 4 years ago
Metadata Files
Readme
Citation
README.md
taxo_scorer
Script to proceed to taxonomically informed scoring in metabolite annotation
The maintained repository is now: https://github.com/taxonomicallyinformedannotation/
Owner
- Name: Pierre-Marie Allard
- Login: oolonek
- Kind: user
- Website: https://www.unifr.ch/bio/en/groups/allard/
- Repositories: 5
- Profile: https://github.com/oolonek
Citation (CITATION.cff)
cff-version: 1.2.0
message: "Please cite the following works when using this software."
authors:
- family-names: Rutz
given-names: Adriano
orcid: https://orcid.org/0000-0003-0443-9902
- family-names: Allard
given-names: Pierre-Marie
orcid: https://orcid.org/0000-0003-3389-2191
title: Taxonomically Informed Scoring Enhances Confidence in Natural Products Annotation
url: "https://github.com/oolonek/taxo_scorer"
preferred-citation:
type: article
authors:
- family-names: Rutz
given-names: Adriano
orcid: https://orcid.org/0000-0003-0443-9902
- family-names: Dounoue-Kubo
given-names: Miwa
- family-names: Ollivier
given-names: Simon
orcid: https://orcid.org/0000-0002-7671-1736
- family-names: Bisson
given-names: Jonathan
orcid: https://orcid.org/0000-0003-1640-9989
- family-names: Bagheri
given-names: Mohsen
- family-names: Saesong
given-names: Tongchai
- family-names: Ebrahimi
given-names: Samad Nejad
orcid: https://orcid.org/0000-0003-2167-8032
- family-names: Ingkaninan
given-names: Kornkanok
orcid: https://orcid.org/0000-0002-4415-8489
- family-names: Wolfender
given-names: Jean-Luc
orcid: https://orcid.org/0000-0002-0125-952X
- family-names: Allard
given-names: Pierre-Marie
orcid: https://orcid.org/0000-0003-3389-2191
title: Taxonomically Informed Scoring Enhances Confidence in Natural Products Annotation
year: 2019
journal: Frontiers in Plant Science
volume: 10
doi: 10.3389/fpls.2019.01329
url: "http://dx.doi.org/10.3389/fpls.2019.01329"
identifiers:
- type: "doi"
value: "10.3389/fpls.2019.01329"
- type: "url"
value: "http://dx.doi.org/10.3389/fpls.2019.01329"
- type: "other"
value: "urn:issn:1664-462X"