EoN (Epidemics on Networks)
EoN (Epidemics on Networks): a fast, flexible Python package for simulation, analytic approximation, and analysis of epidemics on networks - Published in JOSS (2019)
https://github.com/springer-math/mathematics-of-epidemics-on-networks
Science Score: 95.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 1 DOI reference(s) in JOSS metadata -
✓Academic publication links
Links to: springer.com -
✓Committers with academic emails
4 of 11 committers (36.4%) from academic institutions -
○Institutional organization owner
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✓JOSS paper metadata
Published in Journal of Open Source Software
Keywords from Contributors
Scientific Fields
Repository
Source code accompanying 'Mathematics of Epidemics on Networks' by Kiss, Miller, and Simon http://www.springer.com/us/book/9783319508047 . Documentation for the software package is at https://epidemicsonnetworks.readthedocs.io/en/latest/
Basic Info
Statistics
- Stars: 161
- Watchers: 10
- Forks: 63
- Open Issues: 50
- Releases: 0
Metadata Files
README.md
Springer Source Code
This repository accompanies Mathematics of Epidemics on Networks by Kiss, Miller, and Simon (Springer, 2017).
It contains the EoN (Epidemics on Networks) python software accompanying the book.
Corrections
For corrections or to report an error to the content in the published book, see the file errata.md and follow instructions there.
To report a bug in the code please use the new issue option on the issues page.
Software Documentation
Documentation (including installation instructions) is available at http://epidemicsonnetworks.readthedocs.io/en/latest/
Software Releases
We released v1.0 on 9 Aug 2018
To see changes since v1.0, please look at our list of changes
We released v1.1 on 13 Dec 2019. This is the version described in our paper.
We released v1.2 on 25 Jun 2024. We hope to move on to v1.3 fairly quickly after this long gap.
Contributions
We welcome new contributors. Please help test the code or suggest improvements.
Owner
- Name: Springer Math
- Login: springer-math
- Kind: organization
- Website: http://www.springer.com/mathematics/
- Repositories: 3
- Profile: https://github.com/springer-math
Source code for books published by Springer Math
JOSS Publication
EoN (Epidemics on Networks): a fast, flexible Python package for simulation, analytic approximation, and analysis of epidemics on networks
Authors
La Trobe University, Melbourne, Australia, Institute for Disease Modeling, Seattle, Washington, USA
Institute for Disease Modeling, Seattle, Washington, USA
Editor
Lorena Pantano
Tags
SIR SIS Epidemic Network Stochastic simulationGitHub Events
Total
- Issues event: 4
- Watch event: 12
- Issue comment event: 3
- Pull request event: 1
- Fork event: 1
Last Year
- Issues event: 4
- Watch event: 12
- Issue comment event: 3
- Pull request event: 1
- Fork event: 1
Committers
Last synced: 5 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| joelmiller | j****r@g****m | 267 |
| tinghf | t****f@g****m | 7 |
| Tony Ting | t****g@i****g | 5 |
| Nick Valente | n****e@b****m | 4 |
| William Waites | w****s@t****k | 2 |
| jsheen | j****n@s****u | 1 |
| Lorena A. Barba | l****a@g****u | 1 |
| Kyle Niemeyer | k****r@g****m | 1 |
| Karl Pettersson | k****8@y****m | 1 |
| Gianr Lazz | g****i@e****h | 1 |
| CWiswell-IDM | c****l@i****m | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 4 months ago
All Time
- Total issues: 97
- Total pull requests: 8
- Average time to close issues: 4 months
- Average time to close pull requests: 8 months
- Total issue authors: 32
- Total pull request authors: 8
- Average comments per issue: 1.65
- Average comments per pull request: 0.5
- Merged pull requests: 7
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 4
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 0.25
- Average comments per pull request: 0.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- joelmiller (49)
- debmalya191 (6)
- SushantGautam (3)
- mauimoana (3)
- atilaajones (2)
- crinix16 (2)
- hagberg (2)
- Kamol-Roy (2)
- jsheen (2)
- gaianoseworthy (2)
- vermouthdky (1)
- j-bowhay (1)
- hcars (1)
- janmoelter (1)
- jaowen (1)
Pull Request Authors
- wyattscarpenter (2)
- klpn (1)
- kyleniemeyer (1)
- wwaites (1)
- ggrrll (1)
- jsheen (1)
- CWiswell-IDM (1)
- labarba (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 280 last-month
- Total dependent packages: 1
- Total dependent repositories: 2
- Total versions: 19
- Total maintainers: 1
pypi.org: eon
Epidemics on Networks
- Homepage: https://springer-math.github.io/Mathematics-of-Epidemics-on-Networks/
- Documentation: https://eon.readthedocs.io/
- License: mit
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Latest release: 1.0.8
published over 6 years ago
Rankings
Maintainers (1)
Dependencies
- matplotlib *
- networkx >=2
- numpy *
- scipy *