runcrate - 0.6.1

What's Changed

• upgrade to cwl-utils 0.30 by @mr-c in https://github.com/ResearchObject/runcrate/pull/67
• Bump actions/setup-python from 4 to 5 by @dependabot in https://github.com/ResearchObject/runcrate/pull/74
• Bump codecov/codecov-action from 3 to 4 by @dependabot in https://github.com/ResearchObject/runcrate/pull/75
• Fix failing conversion if author name is not set by @dnlbauer in https://github.com/ResearchObject/runcrate/pull/76
• Bump cwl-utils from 0.32 to 0.33 by @dependabot in https://github.com/ResearchObject/runcrate/pull/80
• Bump cwl utils in setup.cfg by @simleo in https://github.com/ResearchObject/runcrate/pull/81
• Bump peaceiris/actions-gh-pages from 3 to 4 by @dependabot in https://github.com/ResearchObject/runcrate/pull/79
• convert almost all of setup.cfg to pyproject.toml using ini2toml. by @mr-c in https://github.com/ResearchObject/runcrate/pull/82
• Bump cwl-utils from 0.33 to 0.34 by @dependabot in https://github.com/ResearchObject/runcrate/pull/83
• Bump cwl-utils from 0.34 to 0.35 by @dependabot in https://github.com/ResearchObject/runcrate/pull/86
• Bump codecov/codecov-action from 4 to 5 by @dependabot in https://github.com/ResearchObject/runcrate/pull/87
• Bump min Python version to 3.9 by @simleo in https://github.com/ResearchObject/runcrate/pull/90
• Bump cwl-utils from 0.35 to 0.36 by @dependabot in https://github.com/ResearchObject/runcrate/pull/88
• Bump cwl-utils from 0.36 to 0.37 by @dependabot in https://github.com/ResearchObject/runcrate/pull/91
• Root Data Entity required properties by @simleo in https://github.com/ResearchObject/runcrate/pull/92

New Contributors

• @dnlbauer made their first contribution in https://github.com/ResearchObject/runcrate/pull/76

Full Changelog: https://github.com/ResearchObject/runcrate/compare/0.5.0...0.6.1

- Common Workflow Language
Published by simleo about 1 year ago

runcrate - runcrate 0.5.0

What's Changed

• Bump cwl-utils from 0.29 to 0.31 by @dependabot in https://github.com/ResearchObject/runcrate/pull/71
• Convert SoftwareRequirement by @simleo in https://github.com/ResearchObject/runcrate/pull/72

Full Changelog: https://github.com/ResearchObject/runcrate/compare/0.4.0...0.5.0

- Common Workflow Language
Published by simleo about 2 years ago

runcrate - runcrate 0.4.0

What's Changed

• More file metadata by @simleo in https://github.com/ResearchObject/runcrate/pull/69
• Convert encoding format for output files by @simleo in https://github.com/ResearchObject/runcrate/pull/70

Full Changelog: https://github.com/ResearchObject/runcrate/compare/0.3.0...0.4.0

- Common Workflow Language
Published by simleo over 2 years ago

runcrate - runcrate 0.3.0

What's Changed

• Bump actions/checkout from 3 to 4 by @dependabot in https://github.com/ResearchObject/runcrate/pull/58
• Bump codecov/codecov-action from 3 to 4 by @dependabot in https://github.com/ResearchObject/runcrate/pull/59
• Set codecov-action back to v3 by @simleo in https://github.com/ResearchObject/runcrate/pull/60
• report: do not expect input and output to be lists by @simleo in https://github.com/ResearchObject/runcrate/pull/61
• Update rocrate requirement from ~=0.8 to ~=0.9 by @dependabot in https://github.com/ResearchObject/runcrate/pull/62
• convert: add whole workflow-run context to the crate by @simleo in https://github.com/ResearchObject/runcrate/pull/63
• Add ContainerImage by @simleo in https://github.com/ResearchObject/runcrate/pull/66

Full Changelog: https://github.com/ResearchObject/runcrate/compare/0.2.0...0.3.0

- Common Workflow Language
Published by simleo over 2 years ago

runcrate - runcrate 0.2.0

What's Changed

• Run module by @simleo in https://github.com/ResearchObject/runcrate/pull/24
• convert: add input object document by @simleo in https://github.com/ResearchObject/runcrate/pull/25
• run: Support list of files/dirs in PropertyValue by @simleo in https://github.com/ResearchObject/runcrate/pull/27
• Add memoryRequirements to tools by @simleo in https://github.com/ResearchObject/runcrate/pull/28
• Convert cwl label, doc and intent by @simleo in https://github.com/ResearchObject/runcrate/pull/29
• Handle multi source step inputs by @simleo in https://github.com/ResearchObject/runcrate/pull/31
• Fix convertcwltype by @simleo in https://github.com/ResearchObject/runcrate/pull/37
• Handle step input mappings with no source by @simleo in https://github.com/ResearchObject/runcrate/pull/38
• Handle outputs with multiple output sources by @simleo in https://github.com/ResearchObject/runcrate/pull/43
• Unpin & upgrade cwl-utils version by @mr-c in https://github.com/ResearchObject/runcrate/pull/40
• Bump networkx from 2.8 to 3.1 by @dependabot in https://github.com/ResearchObject/runcrate/pull/44
• Fix crash related to skipped subworkflows by @simleo in https://github.com/ResearchObject/runcrate/pull/45
• Update rocrate requirement from ~=0.7 to ~=0.8 by @dependabot in https://github.com/ResearchObject/runcrate/pull/47
• Run module: fix check_runnable by @simleo in https://github.com/ResearchObject/runcrate/pull/48
• run: don't break if alternateName is same as id by @simleo in https://github.com/ResearchObject/runcrate/pull/50
• Support for inline tools by @simleo in https://github.com/ResearchObject/runcrate/pull/52
• Get data paths from manifest by @simleo in https://github.com/ResearchObject/runcrate/pull/57

New Contributors

• @mr-c made their first contribution in https://github.com/ResearchObject/runcrate/pull/40
• @dependabot made their first contribution in https://github.com/ResearchObject/runcrate/pull/44

Full Changelog: https://github.com/ResearchObject/runcrate/compare/0.1.2...0.2.0

- Common Workflow Language
Published by simleo over 2 years ago

runcrate - runcrate 0.1.2

What's Changed

• Fix context extra terms by @simleo in https://github.com/ResearchObject/runcrate/pull/23
• Set param names to those expected by CWL by @simleo in https://github.com/ResearchObject/runcrate/pull/22

Full Changelog: https://github.com/ResearchObject/runcrate/compare/0.1.1...0.1.2

- Common Workflow Language
Published by simleo almost 3 years ago

runcrate - runcrate 0.1.1

Initial release.

- Common Workflow Language
Published by simleo almost 3 years ago