python-intermediate-inflammation
https://github.com/sgibson-mse/python-intermediate-inflammation
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.4%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: sgibson-mse
- License: mit
- Language: Python
- Default Branch: main
- Size: 56.6 KB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 1
- Releases: 0
Metadata Files
README.md
Introduction
This is a template software project repository used by the Intermediate Research Software Development Skills In Python.
Purpose
This repository is intended to be used as a code template which is copied by learners at Intermediate Research Software Development Skills In Python workshops.
This can be done using the Use this template button towards the top right of this repo's GitHub page.
TODOs
In a number of places, TODO comments indicate where code may be added during the
workshop as the necessary topics are introduced.
Each TODO comment should refer to a particular section of the workshop:
TODO(lesson-collaborative)- refers to the lesson titled 'Collaborative Software Development'TODO(lesson-robust)- refers to the lesson titled 'Writing Robust Software'TODO(lesson-design)- refers to the lesson titles 'Software Design in Python'
Tests
Several tests have been implemented already, some of which are currently failing. These failing tests set out the requirements for the additional code to be implemented during the workshop.
The tests should be run using pytest, which will be introduced during the workshop.
Owner
- Name: Sam Gibson
- Login: sgibson-mse
- Kind: user
- Repositories: 2
- Profile: https://github.com/sgibson-mse
Spectroscopy Diagnostic Physicist.
Citation (CITATION.cff)
cff-version: 1.2.0
message: If you use this software, please cite it using these metadata.
title: Inflam Research Software
abstract: This is research software to assess inflammation patients.
authors:
- family-names: Gibson
given-names: Sam
orcid: "https://orcid.org/my-orcid?orcid=0000-0003-3754-6130"
- name: "The Research Software project"
version: 0.11.2
date-released: "2022-02-02"
identifiers:
- description: This is the collection of archived snapshots of all versions of My Research Software
type: doi
value: "10.5281/zenodo.123456"
- description: This is the archived snapshot of version 0.11.2 of My Research Software
type: doi
value: "10.5281/zenodo.123457"
license: Apache-2.0
repository-code: "https://github.com/citation-file-format/my-research-software"
GitHub Events
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Dependencies
- Pillow ==9.0.0
- Pygments ==2.11.2
- asttokens ==2.0.5
- attrs ==21.4.0
- backcall ==0.2.0
- black ==21.12b0
- click ==8.0.3
- coverage ==6.3
- cycler ==0.11.0
- decorator ==5.1.1
- executing ==0.8.2
- fonttools ==4.29.0
- iniconfig ==1.1.1
- jedi ==0.18.1
- kiwisolver ==1.3.2
- matplotlib ==3.5.1
- matplotlib-inline ==0.1.3
- mypy-extensions ==0.4.3
- numpy >1.21.4
- packaging ==21.3
- parso ==0.8.3
- pathspec ==0.9.0
- pexpect ==4.8.0
- pickleshare ==0.7.5
- platformdirs ==2.4.1
- pluggy ==1.0.0
- prompt-toolkit ==3.0.24
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- py ==1.11.0
- pyparsing ==3.0.7
- pytest ==6.2.5
- pytest-cov ==3.0.0
- python-dateutil ==2.8.2
- six ==1.16.0
- stack-data ==0.1.4
- toml ==0.10.2
- tomli ==1.2.3
- traitlets ==5.1.1
- typing-extensions ==4.0.1
- wcwidth ==0.2.5