jubench-picongpu

JUPITER Benchmark Suite: PIConGPU Benchmark

https://github.com/fzj-jsc/jubench-picongpu

Science Score: 62.0%

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CITATION.cff file
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codemeta.json file
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Links to: zenodo.org
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Organization fzj-jsc has institutional domain (www.fz-juelich.de)
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Low similarity (9.6%) to scientific vocabulary

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Repository

JUPITER Benchmark Suite: PIConGPU Benchmark

Basic Info

Host: GitHub
Owner: FZJ-JSC
License: mit
Language: Jupyter Notebook
Default Branch: main
Size: 198 KB

Statistics

Stars: 0
Watchers: 1
Forks: 0
Open Issues: 0
Releases: 2

Created over 1 year ago · Last pushed over 1 year ago

Metadata Files

Readme License Citation

JUPITER Benchmark Suite: PIConGPU

This benchmark is part of the JUPITER Benchmark Suite. See the repository of the suite for some general remarks.

This repository contains the PIConGPU benchmark. DESCRIPTION.md contains details for compilation, execution, and evaluation.

The source code of PIConGPU is included in the ./src/ subdirectory as a submodule from the upstream PIConGPU repository at github.com/ComputationalRadiationPhysics/picongpu.

Quickstart

```

Obtain the benchmark if not present

git clone --recursive $REPO

Run the benchmark using JUBE

jube run benchmark/jube/benchmark.xml -t {baseline,highlarge,highmedium,high_small}

``` This will obtain the required sources from GitHub, perform a full build and run the benchmark. After the benchmark runs are complete, one can analyse the benchmark runs and generate a results table by executing the following,

``` jube analyse benchmark/jube/run --id XYZ jube result benchmark/jube/run --id XYZ

```

Results

Example results are given in the following

Baseline

The baseline test uses 8 nodes on the JUWELS booster with 4 GPUs per node and uses a grid size -g 1024 1024 512. Following is the example output on the JUWELS booster using "jube run benchmark.xml -t baseline"

|version |system |nnodes |nconfig |gridconfig |simtime| |-------------|-------------|--------|----------------|----------------|-------| |26cbd45b2c9 |juwelsbooster|8 |-d 4 4 2 |-g 1024 1024 512|466.155|

Large Scale

This is the second mode of the benchmark, designed to run at a scale of around 1000 PFLOP/s. Below is the example out sourced from JUWELS Booster and its validation data.

|version |system |nnodes|nconfig |gridconfig |simtime| |-----------|-------------|------|-----------|-----------------|-------| |26cbd45b2c9|juwelsbooster|256 |-d 16 8 8 |-g 4096 2048 2048|466.567| |26cbd45b2c9|juwelsbooster|384 |-d 16 16 6 |-g 4096 3072 2048|470.815| |26cbd45b2c9|juwelsbooster|512 |-d 16 16 8 |-g 4096 4096 2048|466.618| |26cbd45b2c9|juwelsbooster|640 |-d 16 16 10|-g 4096 4096 2560|466.785|

Owner

Name: Jülich Supercomputing Centre
Login: FZJ-JSC
Kind: organization
Location: Germany

Website: https://www.fz-juelich.de/en/ias/jsc
Twitter: fzj_jsc
Repositories: 29
Profile: https://github.com/FZJ-JSC

Jülich Supercomputing Centre provides HPC resources and expertise. Part of Forschungszentrum Jülich.

Citation (CITATION.cff)

cff-version: 1.2.0
title: "JUPITER Benchmark Suite: PIConGPU"
message: >-
  In addition to citing this benchmark repository, please also cite either the JUPITER Benchmark Suite or the accompanying SC24 paper
authors:
  - given-names: Ujjwal
    family-names: Sinha
    affiliation: Forschungszentrum Jülich, Jülich Supercomputing Centre
    orcid: 'https://orcid.org/0000-0002-4609-0940'
  - given-names: Jayesh
    family-names: Badwaik
    affiliation: Forschungszentrum Jülich, Jülich Supercomputing Centre
    orcid: 'https://orcid.org/0000-0002-5252-8179'
  - given-names: Andreas
    family-names: Herten
    affiliation: Forschungszentrum Jülich, Jülich Supercomputing Centre
    orcid: 'https://orcid.org/0000-0002-7150-2505'
  - given-names: Sebastian
    family-names: Achilles
    affiliation: Forschungszentrum Jülich, Jülich Supercomputing Centre
    orcid: 'https://orcid.org/0000-0002-1943-6803'
abstract: "The PIConGPU benchmark of the JUPITER Benchmark Suite"
identifiers:
  - type: doi
    value: 10.5281/zenodo.12788381
    description: Version-agnostic Zenodo Identifier
repository-code: 'https://github.com/FZJ-JSC/jubench-picongpu/'
license: MIT
date-released: '2024-07-20'
references:
  - title: "JUPITER Benchmark Suite"
    type: software
    doi: 10.5281/zenodo.12737073

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