Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/fertiglab/actions

https://github.com/fertiglab/actions

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.1%) to scientific vocabulary
Last synced: 8 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: FertigLab
  • License: gpl-3.0
  • Language: R
  • Default Branch: main
  • Size: 5.99 MB
Statistics
  • Stars: 0
  • Watchers: 5
  • Forks: 0
  • Open Issues: 1
  • Releases: 3
Created over 2 years ago · Last pushed almost 2 years ago
Metadata Files
Readme License

README.md

R build status R build status

Shareable workflows

There are github actions nicely shared by the r-lib team to the r community, but workflows are not shared. This repository is created to make workflows shareable with a just a couple of lines of code across (not necessarily only) FertigLab.

r-build-check

This is the main shareable workflow, ready to be triggered by another, external workflow. When triggered, it performs repository checkout, building and checking of an R package in three different platforms: mac os, windows, and ubuntu.

call-example

This workflow uses the r-build-check as an example of integration. In case you'd like to use r-build-check, simply put the call-example code into your .github/workflows/[pick a name].yml file. Do add .github to .Rbuildignore to avoid check warnings.

Owner

  • Name: FertigLab
  • Login: FertigLab
  • Kind: organization
  • Email: ejfertig@jhmi.edu

Software projects in computational biology and bioinformatics in Elana Fertig's lab in Oncology Biostatistics and Bioinformatics at JHMI

GitHub Events

Total
Last Year

Dependencies

.github/workflows/call-example.yml actions
.github/workflows/r-build-check.yml actions
  • actions/checkout v3 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests