https://github.com/fertiglab/spacemarkersguide
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 3 DOI reference(s) in README -
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.8%) to scientific vocabulary
Last synced: 5 months ago
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JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: FertigLab
- Language: HTML
- Default Branch: main
- Homepage: https://fertiglab.github.io/SpaceMarkersGuide/
- Size: 2.4 MB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Created about 3 years ago
· Last pushed over 2 years ago
https://github.com/FertigLab/SpaceMarkersGuide/blob/main/
# SpaceMarkers An R/Bioconductor software tool to identify genes associated with latent space interactions in spatial transcriptomics. ## Citation If you use the SpaceMarkers software please cite: Atul Deshpande, Melanie Loth, et al., [Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces](https://doi.org/10.1101/2022.06.02.490672). *bioRxiv* 2022. doi:10.1101/2022.06.02.490672 ## Installation You can install SpaceMarkers directly from the Github source. ``` install.packages("remotes") remotes::install_github("FertigLab/SpaceMarkers", dependencies = TRUE, build_vignettes = TRUE) ```
Owner
- Name: FertigLab
- Login: FertigLab
- Kind: organization
- Email: ejfertig@jhmi.edu
- Repositories: 68
- Profile: https://github.com/FertigLab
Software projects in computational biology and bioinformatics in Elana Fertig's lab in Oncology Biostatistics and Bioinformatics at JHMI